Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1456 |
Symbol | |
ID | 4202587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1638497 |
End bp | 1641052 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082334 |
Product | hypothetical protein |
Protein accession | YP_695899 |
Protein GI | 110799663 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.291506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTTAA ATATAAAGAT AAGTGACAAA TTAAAATTAT TTTTTAAAAT AGCATTCGTT TCCGTAGTAA TACTATTTAT AGTTAGGGAA TTTACTTCAG TATTTAAAAA TTTCAATTCA GAATATTTCT TTATTTATAG AAATAAACTA GACTTTTTAA ACCTATTAAT AATTGCAGCA TTAGGTATAA TTTCTTACAT TCCTTTATCT TTCTACGATT TTATTTTAAA GAGAAAAGTT GGAATAAGAT TAAAAAATAG AAAGTTATAT AAGTATTCTT GGATAGCAAG TTCCATTGCA AGTTTACTTG GATTTGGAGG AGCTACATCC TTAGCTTTTA AACAGTATTT TTATGGTGAC TATGTAGATG ATAAAAAGAA ATTATTAAAA GAAATTGGTA AAATAGTAGC CTTAAACTTA ACAGGCTTAT CAATAGTTTG TTGTACATAT ATGGGGATTA GAATATCTTC ATGGAATAAC CTAGGTATAA TAAAATATGC CATAGGAATA ATAGCTTTAT ATGCACCAGG TTTTATAATT TACTCAGCTT ATAAATATAG CAAAACAAGG GATAAGTTAG AGTTTTTCAG TACTTTAGGT ATTATATTCA TATCATTTTT AGAGTGGCTT ACAACAATAA TTTTAATTTA TGCAACTTTA AGAATAACAG GAGCATCAAT AAGTGTTTTA ACTTTCTTAC CAATATATAT TGAAGCAGCG GTTGTAGGAA TGATCAGTAT GATTCCAGGG GGAATTGGTA CCTTTGACTT AACCTTTATG ACTGGATTGG ATGTTTTAGG TATTCCTATA GAACAAACCC TATTAGTTAT AATACTTTAT AGAATAAGTT ACTATATAGT TCCAGCTCTT ATAGGTGTAT TACTTTTTGT ACATGATTTT GGTGGTAAAA TAAATAAAAA GTTTAATGGA TTACCTTATG AAATAGTTTC TAAGGTGGCT TATAAGATAG TAGTTTCTTT AGTATTTATA TCAGGAGCTA TTATTGTTTT ATCAAATATA GCACCTCAAT ATTTATTAAA GATAAAATTA TTAAAAGAAA TTTTAGGTAA ACAGGTATTA GGCTTATCAA TTGGAATGAG CGTAGTACTA GGATTTTTAA TAATGCTTGC AGCTCTTATG CTAAAATACA GGGCTAAAAG TATTTACAAA GCAAGTATGG TTTTATTTAT ATTAGGAATA ATATTATCCT TAACAAAGGG AATTAATCCT TATGAATTAG TATTTTTAAT TATTGTAGCG TACCTTTTAT ATTTAAGTAA GAGAATGTTC TACAGGGATA GTTTTGTTGT AAGTTGTAAA AACACCTTAA TAGATTCAGG GATATTAATT GCATCTTTTT CAATTTATTT CTTTATTTTA ATTACCTTTG GAACACATCT TAAATATGTA GGAATTGTTC GTAAAATGCC TTATAAGATG GCGTATAAAT TTGGATTTAT AGCCTTTGCT TTAGTAACTG TAATATATGT AGCTATTTAC TTTTTAAATA TAAGAAGAAA AATTCCTGTT AAGACCTTTG ATGAATGTAG CGAATATGTA GAAAAGATAA TAGAAGAATA CAAGGGTGAT TCTCTAACAC ATTTAGTATT TTTAAAGGAC AAGTATATTT ATTTAAATGA AGATAAGGAT CTTTTCATTC AATATGAAGT CTATGGAGAT AAGCTTTTTG TTTTAGGAAA TCCTGTGGGA AATAATGAAA ATCTATTTAG GGAAATAGAA AAGTTTTGTG AGTATGCTGA TAATTATGGT TACACACCAG TTTTTTACCA GGTTAATGAT GAAATGATAA GTTACCTTCA CTCTAATGGA TATGATTTTA TGAAAATTGG AGAAGAAGCT AAGGTTGATG TAAAAGAATT TAAAGTTGTA GGAAATAAAA TGAAGAGTTT AAAAACTTCA AGAAGTAAGG TGACTAAGGA AGGTTATACT TTCCACATGG TTGAACCACC TTTTTCAAAG GAATTTTTAG ATTCCTTAAG AGAAATATCA GATGAATGGT TAGATGGAAG AAAAGAAAAA GGATTTTCAG TGGGATTCTT TGATGAAGAT TATTTAAATA AAGCTCCTAT AGCTATTTTA AAGGATAGAG AGGGAGAAAT AAAAGCCTTT GCTAATATAA TGTATATGTA TGATGATGAA AGCTTCTCAG TGGATTTAAT GAGATTTAGC AAAAATACTC CAAGGGGAGT TATGGACTTT ATGTTCATAA ATTTAATTGA GTATGGAAAA GAAAAGGGAT ATGAAATATT CAACATGGGA ATGGCTCCTT TAGCCAATGT TGGTTTATCT AAATATGCTT TCTGGAATGA AAAATTAGCC CTTCAATTCT ATGAGAATGG ACAAGCACTT TACTCCTTTA AAGGATTAAG ACGTTTTAAA GAGAAGTTTA GTCATAATTG GGAGTATAAA TATATTGCTT ACAGAAGAAA TACATCCATA CTAATAACGG TAATACAAGC AGCTATAGTT TGTTCAAGAA ACAGAAATGT AGATGAAAGT ATAGTTGTAA GAAACTTAAA AAGCTTAATT AAATAA
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Protein sequence | MKLNIKISDK LKLFFKIAFV SVVILFIVRE FTSVFKNFNS EYFFIYRNKL DFLNLLIIAA LGIISYIPLS FYDFILKRKV GIRLKNRKLY KYSWIASSIA SLLGFGGATS LAFKQYFYGD YVDDKKKLLK EIGKIVALNL TGLSIVCCTY MGIRISSWNN LGIIKYAIGI IALYAPGFII YSAYKYSKTR DKLEFFSTLG IIFISFLEWL TTIILIYATL RITGASISVL TFLPIYIEAA VVGMISMIPG GIGTFDLTFM TGLDVLGIPI EQTLLVIILY RISYYIVPAL IGVLLFVHDF GGKINKKFNG LPYEIVSKVA YKIVVSLVFI SGAIIVLSNI APQYLLKIKL LKEILGKQVL GLSIGMSVVL GFLIMLAALM LKYRAKSIYK ASMVLFILGI ILSLTKGINP YELVFLIIVA YLLYLSKRMF YRDSFVVSCK NTLIDSGILI ASFSIYFFIL ITFGTHLKYV GIVRKMPYKM AYKFGFIAFA LVTVIYVAIY FLNIRRKIPV KTFDECSEYV EKIIEEYKGD SLTHLVFLKD KYIYLNEDKD LFIQYEVYGD KLFVLGNPVG NNENLFREIE KFCEYADNYG YTPVFYQVND EMISYLHSNG YDFMKIGEEA KVDVKEFKVV GNKMKSLKTS RSKVTKEGYT FHMVEPPFSK EFLDSLREIS DEWLDGRKEK GFSVGFFDED YLNKAPIAIL KDREGEIKAF ANIMYMYDDE SFSVDLMRFS KNTPRGVMDF MFINLIEYGK EKGYEIFNMG MAPLANVGLS KYAFWNEKLA LQFYENGQAL YSFKGLRRFK EKFSHNWEYK YIAYRRNTSI LITVIQAAIV CSRNRNVDES IVVRNLKSLI K
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