Gene CJE0038 details

Gene Information

• Locus tag: CJE0038
• Symbol: typA
• ID: 3230802
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: -
• Start bp: 56202
• End bp: 58010
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637291403
• Product: GTP-binding protein TypA
• Protein accession: YP_178065
• Protein GI: 57237053
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.368844
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAAACA TTAGAAATAT AGCAGTTATA GCTCACGTTG ACCATGGTAA AACCACTATG 
GTAGATGAAT TATTAAAACA ATCAGGCACC TTTAGCGAAA GAGAACAAAT TTCGGAACGC 
GTTATGGATA GCAACGATAT AGAAAAAGAA CGTGGCATTA CCATACTTTC AAAAAACACA 
GCGATCAATT ACAAAGGTAC AAAAATCAAC ATCATAGATA CTCCAGGGCA TGCTGATTTT 
GGCGGAGAAG TAGAACGTGT TTTAAAAATG ATTGATGGAG TTTTGCTTTT AGTAGATGCT 
CAAGAAGGCG TTATGCCACA AACTAAATTC GTGGTTAAAA AAGCTTTATC TTTAGGGCTT 
AAACCTATAG TTGTAATCAA CAAAATAGAC AAACCAGCTG CCGATCCTGA AAGAGTGATC 
AATGAAATTT TTGATCTTTT TGTAGCCCTA GATGCAAACG ATGAGCAACT TGACTTTGCT 
ATAGTTTATG CTGCAGCAAA AAATGGTTAT GCTAAGCTTG ATCTAAACGA TGAAAGTGAT 
AATATGGAGC CACTTTTTAA AACCATACTT GAACGCGTTC CAGCTCCAAG TGGTAGTGAT 
GAAAATCCTT TGCAGCTTCA AGTTTTCACT TTGGGGTATG ATAATTTCGT AGGTAAAATA 
GGCATTGCTA GAATTTTCAA TGGGGTTGTG AAGAAAAACC AAAGCGTAAT GCTTGCAAAA 
GCTGATGGTA CCAAGGTAAA TGGTAGAATT TCAAAACTCA TTGGCTTTAT GGGCTTAGAA 
AAAATGGACA TCGAAGAAGC AGGAAGTGGA GATATCGTAG CTATAGCAGG TTTTGAAGCT 
TTAGATGTGG GTGATAGCGT TGTAGATCCA AACAATCCTA TGCCACTTGA TCCTTTACAC 
ATTGAAGAGC CGACTTTAAG CATAGTATTT TCTGTAAATG ATGGACCATT AGCAGGAACT 
GAAGGAAAAC ATGTAACTTC AAATAAAATC GCTGAACGTT TAGAAGCTGA AATGAAAACT 
AATATTGCTA TGAAATACGA AAGCACAGGC GAAGGTAAAT TTAAAGTAAG CGGTAGGGGC 
GAACTTCAAA TCACTATTTT AGCTGAAAAT ATGCGTCGTG AAGGTTTTGA GTTTTGCATG 
GGAAGACCTG AAGTTATCGT AAAAGTTGAA GATGGAGTTA AAACAGAACC TTTTGAACAT 
TTAGTTATCG ATGTGCCTGA AGAATTTAGC GGTGCGGTAA TAGAAAAACT TGGCAAAAGA 
AAAGCTGAAA TGAAAACCAT GGCGCCAACA GGCGATGGAC AAACAAGACT TGAGTTTGAA 
ATTCCAGCAC GCGGACTTAT AGGTTTTAGA AGTCAGTTTT TAACTGATAC CAAAGGCGAA 
GGCGTGATGA ATCATAGCTT TTTAGAATTC CGTCCTTTTA GCGGTGCGGT TGAAAAGCGT 
AATAATGGAG CGTTAATTTC TATGGAAAAT GGCGTGGCTT TAGGGTATTC TTTGTTTAAC 
CTTCAAGAGC GTGGAGTACT TTTCATAGAG CCTCAAACTA AAGTTTATAC CGGTATGATT 
ATAGGTGAGC ACTCTCGTCC AAATGATTTA GATGTTAATC CTATCAAAGG AAAGAATCTT 
ACCAATGTAA GAGCAAGTGG AAGCGATGAT GCAATCAAAC TTGTGCCACC TAGAAAATTA 
AGTCTTGAAA GAGCTTTAGA GTGGATAGAA GAAGATGAAC TTGTAGAAGT TACACCTGTA 
AATGTGCGTG TTCGCAAACG CTATCTTGAC CCAACTCAAA GAAAAAGAAT GGAAAAAGCA 
AAATCTTAA 

 

Protein sequence

MENIRNIAVI AHVDHGKTTM VDELLKQSGT FSEREQISER VMDSNDIEKE RGITILSKNT 
AINYKGTKIN IIDTPGHADF GGEVERVLKM IDGVLLLVDA QEGVMPQTKF VVKKALSLGL 
KPIVVINKID KPAADPERVI NEIFDLFVAL DANDEQLDFA IVYAAAKNGY AKLDLNDESD 
NMEPLFKTIL ERVPAPSGSD ENPLQLQVFT LGYDNFVGKI GIARIFNGVV KKNQSVMLAK 
ADGTKVNGRI SKLIGFMGLE KMDIEEAGSG DIVAIAGFEA LDVGDSVVDP NNPMPLDPLH 
IEEPTLSIVF SVNDGPLAGT EGKHVTSNKI AERLEAEMKT NIAMKYESTG EGKFKVSGRG 
ELQITILAEN MRREGFEFCM GRPEVIVKVE DGVKTEPFEH LVIDVPEEFS GAVIEKLGKR 
KAEMKTMAPT GDGQTRLEFE IPARGLIGFR SQFLTDTKGE GVMNHSFLEF RPFSGAVEKR 
NNGALISMEN GVALGYSLFN LQERGVLFIE PQTKVYTGMI IGEHSRPNDL DVNPIKGKNL 
TNVRASGSDD AIKLVPPRKL SLERALEWIE EDELVEVTPV NVRVRKRYLD PTQRKRMEKA 
KS