Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0847 |
Symbol | purC |
ID | 5407989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 784259 |
End bp | 784978 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640870536 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_001406411 |
Protein GI | 154148519 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00258122 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGTTA CAAAAAAAGA TATGATTTAT GAAGGCAAAG GCAAAAAAAT GTGGTCTGTT GCCGAAGATG AAAATCTTTT GATTGCTGAA TTTAAAGATG ATTTAACCGC TTTTAACGGA ATCAAAAAAT CAAGTGAAAA AGGAAAAGGA GCGCTAAATA ATAAAATTTC AACTCAACTT TTCCATCTTT TGGAAAAAAA CGGTATAAAA ACCGATTTGG TTGAAACTAT CAACGATACA GAGCAAGTTG TAAAAAAAGT TAAAATTTTT CCACTTGAAG TAATTGCAAG AAATATTGCC ACAGGCTCAC TTACAAAGCG ACTTGGCATA AAAGACGGCA CTGTTTTACC TTTTACTTTA GTTGAGTTTT GCTACAAAGA CGACGATTTG GGAGATCCTA TTTTAAATGA CGATCATGCA CTACTTTTAG GCGCTGTAAA AGACAAAAAT GAGCTTGAAA ATTTAAGACA AACAGCAATT AAAATAAATA AAATTTTAAA AGAATTTTTC GCAACAAAAA ATTTAAAACT TGTTGATTTT AAAATTGAGC TTGGCAAAGA CAAAGACGGA AATATCTTGC TTGCCGATGA AATAAGCCCT GACAGCTGCA GATTTTGGGA CGCTAAAACA AACGAAAAAC TAGATAAAGA CAGATTTCGC CAAAGTATAG GCAACGTAAA AGTAGCGTAT GAGGAAGTTT TAAGACGAAT CTTATCGTAA
|
Protein sequence | MKVTKKDMIY EGKGKKMWSV AEDENLLIAE FKDDLTAFNG IKKSSEKGKG ALNNKISTQL FHLLEKNGIK TDLVETINDT EQVVKKVKIF PLEVIARNIA TGSLTKRLGI KDGTVLPFTL VEFCYKDDDL GDPILNDDHA LLLGAVKDKN ELENLRQTAI KINKILKEFF ATKNLKLVDF KIELGKDKDG NILLADEISP DSCRFWDAKT NEKLDKDRFR QSIGNVKVAY EEVLRRILS
|
| |