Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0621 |
Symbol | cydA |
ID | 5408022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 566408 |
End bp | 567925 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640870325 |
Product | cytochrome D ubiquinol oxidase, subunit I |
Protein accession | YP_001406208 |
Protein GI | 154148949 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.194199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAC TTGCGTCGGT TGATTGGTCA AGGGCTCAGT TTGCACTTAC CGCTTTATAC CACTTTTTGT TTGTGCCTTT GACTTTAGGG CTTTCATTTA TAATAGCATT TATGGAAACG ATTTACGTAA AAAGTAAAAA CGAAGAGTGG AAAAAAATAA CTAAATTTTG GCTCAAACTT TTTGCTGTAA ATTTCGCTAT CGGCGTTGCT ACAGGCCTTA TAATGGAATT TGAGTTTGGA ACTAATTGGG CAAATTACAG TTGGTTTGTA GGAGATATTT TCGGCGCGCC ACTTGCGATA GAAGGACTTT TCGCATTTTT CCTGGAAGCT ACATTTTTTG CCGTAATGTT TTTCGGATGG GATAAAGTAA GTAAAAAATT TCATCTATTT TCTACATGGT GCGTTGCTAT CGGATCAAAT TTAAGTGCGT TTTGGATACT TGTGGCAAAC GGCTGGATGC AAAATCCGGT AGGAACGGCG TTTAATCCGG ATACTGCAAG AAATGAAATG GTGGATTTTA CCCAAATAGC TCTTTCTCCG ACAGCAATCA GCAAATTTTT ACACACGGTT GGCGGTGGAT ACATTACCTC AGCACTTTTT GTTCTTGGAA TAAGTGCTTA TTTTATACTT AAAAACAAAA ATTTCCAAAT GGCTAAAAAA AGTTTTATAG TTGCTGCGAG CTTTGGGCTT TTAAGCTCTT TATTCGTTTT ATTCAGCGGA GACGAAAGCG CATATCAAGT AGCCCAAAAG CAACCTATGA AACTGGCTAC CATGGAAGGA CTTTATAATG GAGAAGTAAA TAGCGCGATT GTAACCGTAG GAATTTTAAA TCCTAAAAAA GAAATAGACA ATAATGAAGA TCCGTTTTTA TTTCAAATAG AAGCACCGTA TCTTTTGGGA CTTATGGCAA CAAGAGGAAT AAATAATTTT ACTCCTGGAA TCAACGATTT GATAAACGGA AATGAAACTC ATAAAATTCC ATCTATGCAA AGCAGAATCG ATAGCGGAAA AAAAGCTATA AAAGCTCTTG ATGAGTATAA AATTGCAAAA GAAAACGGTG ATACGAATTC GGCTAAAAAA TATAGAGAAA TTTTGCAAAG TAATATGCAA AATTTCGGCT ACGGTTATTT AAATAATCCA AAAGATGCCA TAGCTCCTGT CGGGCTTACA TTTTACAGTT TTAGAGTTAT GGCGGCTCTT GGAATATATT TTATAGGACT TTTTTTTGTG GTAATGTTTT TGAGTATGGC AAACAAAATC GAGAATTTCA GGAAAATTCT TTGGTGTTGC GTATTTAGTA TTCCGCTTGG ATGGATTGCT TGCGAGCTTG GATGGATTGT GGCCGAAGTC GGACGCCAGC CATGGGCTAT ACAAGATATT ATGCCGGTTG GCGTAGCAGC TACGAATTTA TCTTCCGCAA ATATCAAAAT TTCATTTTTC CTTTTTGCAG TGCTGTTTAC GACTCTATTT ATAGCCGAAA TCAAAATAAT GTTAAAGCAA ATTAAGTTAG GATTTTAA
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Protein sequence | MTELASVDWS RAQFALTALY HFLFVPLTLG LSFIIAFMET IYVKSKNEEW KKITKFWLKL FAVNFAIGVA TGLIMEFEFG TNWANYSWFV GDIFGAPLAI EGLFAFFLEA TFFAVMFFGW DKVSKKFHLF STWCVAIGSN LSAFWILVAN GWMQNPVGTA FNPDTARNEM VDFTQIALSP TAISKFLHTV GGGYITSALF VLGISAYFIL KNKNFQMAKK SFIVAASFGL LSSLFVLFSG DESAYQVAQK QPMKLATMEG LYNGEVNSAI VTVGILNPKK EIDNNEDPFL FQIEAPYLLG LMATRGINNF TPGINDLING NETHKIPSMQ SRIDSGKKAI KALDEYKIAK ENGDTNSAKK YREILQSNMQ NFGYGYLNNP KDAIAPVGLT FYSFRVMAAL GIYFIGLFFV VMFLSMANKI ENFRKILWCC VFSIPLGWIA CELGWIVAEV GRQPWAIQDI MPVGVAATNL SSANIKISFF LFAVLFTTLF IAEIKIMLKQ IKLGF
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