| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0564 |
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| Symbol | |
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| ID | 5408398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 512736 |
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| End bp | 515900 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640870269 |
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| Product | AcrB protein |
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| Protein accession | YP_001406152 |
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| Protein GI | 154149372 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00145035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAA AATTTTTCAT ACACAGACCT GTTTTTGCCT GCGTTATTTC TATTATAATA
ACACTTGCAG GACTTGTAAG TTTACGCGGC TTGCCGATAG AAGAATATCC GAATCTTACT
CCTCCTCAAA TAAATGTATT CGCTTCGTAT CCTGGAGCCG ATGCTCAAAC TATAGCTGAA
ACCGTTGCTG CGCCGCTTGA AGATGCACTG AACGGCGTAG AAGATATGAT ATATATGCAA
AGCACTTCAA GTTCGGCAGG AACGATGAGA CTTAGTATTT ATTTTAAAAC TGGCACTTCT
CCGCAAATAG CACAAGTAAA CGTAAATAAC CGCGTAAATC TTGCTAGCAA ACTTTTACCT
GATAATGTTA CAAGGCAAGG AATTAGCGTT TTTGAAAGAA GCGATTCAAT ACTTGAAGTT
ATCAGTTTTT ATGATCCGAG CGGTCAAATG GATATTATAG ATCTCAGTAA CTACTTAACT
ATAAATGTAG TGGACGAAAT AAAACGCGTA AACGGTGTAG GTGAGGCTTT TATAGTAGGA
GACAAAAAAT ACTCTATGCG CGTTTGGATA AAACCTGATT TACTAAATAA ATATGATATT
ACAACATCCG ATGTAATAAA CGCTATAAGC GAACAAAATA CACAATACTC AGTAGGTAAA
ATAGGCGAAT TACCTGAAAA CAGTAATAGC GCATACGTTT TTTCAATAAG GACGGAAGGA
AGACTTGTAA AAGTATCTGA TTTTGAAAAT ATCATAATAA AATCTTTACC GAACGGTTCT
GCTCTAAAAC TAAAAGATGT GGCTAATGTA GAACTTGGAA GTGAAAATTA CATGTCAAAT
AACTTAATAA ACGGACATTA TATGATGCCT ATGTTAGTAT TTATGCAAAC GGACGGCAAC
GCAATTGCTA CAGCTGATGC GGTAAATAAA CGTATTGAAG AATTATCTAA AAATTTTCCC
GGAAATTTAA CTTATAATGT AAATTACAAC ACTACCGATT TCGTAAAAGT CTCAATGAAA
GAAATTTTCC AGACTTTTAT TGAGGCTTTG GTTTTAGTAC TAATCATTAT GTATCTTTTT
TTAGGAAATT TGCGCTCTAC AATAATACCG ATGATAGCAA TTCCGGTTTC TATCATCGGA
ACATTTGCAG GAATTTATGC AGTCGGATTT TCGGTGAATT TAATAACACT TTTCGCAATG
ATATTAGCTA TCGGTATAGT TGTCGATGAT GCAATTATAG TTGTGGAAAA CGTAGAACGG
AACTTGGAAG AAAATCCTAA TATCAGCGTT ATAGAAGCTA CAGAAAAGGC AATGGAAGAA
ATTATGGCGC CTATTATTTC AATAGTTTTA GTTTTGTGTG CCGTTTTCTT GCCTGCAAGT
TTTATCGAGG GCTTTGTAGG AATAATACAA AGACAATTTG CGCTAACTCT TGTTATTTCT
GTTTGTATCT CAGGTATTGT AGCACTTACT TTAACTCCAG CACTTTGTGC AAAATTTTTA
AGACGCGATA TGGCCAAAAA ACCAAAAATT TCACAATGGT TCAATAAAAT TTTTGATATC
AGCACAAATA TTTATGCAGC AGGTGTGGCA AAAATATTAA AACACATAAT TCCTTCTTTA
ATTGTAGTTG CAATTTTGTG TTTTTGTACT TGGCGACTTT TTACAATGGT GCCGGCAAGC
CTTGTACCGG AAGAAGATAA AGGCGTATCA ATTGCGGTAA GCCAACTACC GCCCGCTTCT
ACAATCACAA GAACGGAAAA TGTCATAAAA AAACAAAGCG ACGAACTTCT GAAAAATCCG
CTTATAGATG CGGTTGGCGC TATGATGGGA TATGATCTGT TTGCCGGAGG ACTTAGAGAA
AATGCAACAG TAATATTCTT AAAATTTAAA GATTGGAGTG AAAGAAAAGA AAAAGATCAA
AGCAGTTTTG CTATAAATAA AAAATATAAT ATTTTATTTT CGCAAGATAG AAATTCAACT
ACATTTGTAT TAAATCCACC ACCAATAAAT GGACTTTCTT TAACAGGCGG TTTCGAGCTT
TTCGCTCAAA ACACAACTGG AAAAAGTTTC GCCGAAATAG AAAAAGATAT GAAAGTAGTA
GCTGCCAAAG CAAATGCAAG AGGCGATTTG GTACGCGTGC GAACTACGCT TGATACAAAT
TTCCCGCAAT ATAAACTTAT AGTAAATACT CAAAAAGCAA AAATGCTTAA TGTAAATATT
AAAAATTTGT ATATGACAAT AAATACGATG CTTGGACAAT ATTATGTAAA TGACTTTAAC
TTTCTTGGAA AAACATTTAA AGTAAACGTA AAAGCTGCAG GTGAATACAG AAATTCAGTT
GATGATTTGC GTGCGATTTT TGTAAAAAGC AACGATGGAA AATCGATTCC TGTAAATTCT
TTAATAAAAC TTGAAAATGC TCTTGGACCT GATACTGTAA ATAGATTCAA TGGCTTTCCT
GCCGCAAAAA TTATGGGAGA TCCTGCAGAA GGCTATACTT CAGGTCAAGC AATTGATGCA
ATTGCACAAG TTTTCAAAGA AGAATTTCCT AACGAATACA CTCTTGGATG GTCCGGAACT
TCTTATCAAG AGGTGCAATC AAGCGGTAAA GGTGCTACAG CATTTATTTT CGGTCTAATT
TTCGTTTATT TGATTTTAGC GGCTCAATAT GAAAGATGGC TGATGCCGGC TGCCGTTATG
ACAGCTGTGC CGTTTTCGGT ATTCGGTGCA ATTTTATTTA CATATTTACG TGGACTTACT
AATGACATCT ATTTCCAAAT AGGATTAATC TTACTTATCG GACTTGGAGC AAAAAATGCT
ATATTAATCG TAGAATTTGC GATGACGGAG CACAAAAAAG GCAAAAATAT AATAGAAGCT
TCAATAGCGG CTGCAAGACT TCGTTTTCGT CCGATTGTAA TGACATCTTT GGCGTTTGCA
TTCGGCGTTT TACCGATGGT AATAAGCTCA GGAGCCGGTT CTGCATCAAG ACACTCTCTT
GGAACCGGAG TAATCGGCGG AATGATAGCG GCTTCTACAA TCGCTATTTT CTTTGTGCCG
TTATTTTTCT ATTTGCTTGA AACTTTCAAT AATTGGCAAG CAAAACTATC ACGCACAAAA
GAAATAAAAA GAATAAGAAA AATCAGGAGG GAAGAAAATG CGTAA
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| Protein sequence | MFSKFFIHRP VFACVISIII TLAGLVSLRG LPIEEYPNLT PPQINVFASY PGADAQTIAE
TVAAPLEDAL NGVEDMIYMQ STSSSAGTMR LSIYFKTGTS PQIAQVNVNN RVNLASKLLP
DNVTRQGISV FERSDSILEV ISFYDPSGQM DIIDLSNYLT INVVDEIKRV NGVGEAFIVG
DKKYSMRVWI KPDLLNKYDI TTSDVINAIS EQNTQYSVGK IGELPENSNS AYVFSIRTEG
RLVKVSDFEN IIIKSLPNGS ALKLKDVANV ELGSENYMSN NLINGHYMMP MLVFMQTDGN
AIATADAVNK RIEELSKNFP GNLTYNVNYN TTDFVKVSMK EIFQTFIEAL VLVLIIMYLF
LGNLRSTIIP MIAIPVSIIG TFAGIYAVGF SVNLITLFAM ILAIGIVVDD AIIVVENVER
NLEENPNISV IEATEKAMEE IMAPIISIVL VLCAVFLPAS FIEGFVGIIQ RQFALTLVIS
VCISGIVALT LTPALCAKFL RRDMAKKPKI SQWFNKIFDI STNIYAAGVA KILKHIIPSL
IVVAILCFCT WRLFTMVPAS LVPEEDKGVS IAVSQLPPAS TITRTENVIK KQSDELLKNP
LIDAVGAMMG YDLFAGGLRE NATVIFLKFK DWSERKEKDQ SSFAINKKYN ILFSQDRNST
TFVLNPPPIN GLSLTGGFEL FAQNTTGKSF AEIEKDMKVV AAKANARGDL VRVRTTLDTN
FPQYKLIVNT QKAKMLNVNI KNLYMTINTM LGQYYVNDFN FLGKTFKVNV KAAGEYRNSV
DDLRAIFVKS NDGKSIPVNS LIKLENALGP DTVNRFNGFP AAKIMGDPAE GYTSGQAIDA
IAQVFKEEFP NEYTLGWSGT SYQEVQSSGK GATAFIFGLI FVYLILAAQY ERWLMPAAVM
TAVPFSVFGA ILFTYLRGLT NDIYFQIGLI LLIGLGAKNA ILIVEFAMTE HKKGKNIIEA
SIAAARLRFR PIVMTSLAFA FGVLPMVISS GAGSASRHSL GTGVIGGMIA ASTIAIFFVP
LFFYLLETFN NWQAKLSRTK EIKRIRKIRR EENA
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