| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0090 |
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| Symbol | rpsC |
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| ID | 5409436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 81248 |
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| End bp | 81943 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640869809 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001405703 |
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| Protein GI | 154149468 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.157712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACAAA AAGTTAATCC AATCGGCCTA AGATTAGGTA TAAATAGAAA CTGGGAATCA
AGATGGTTTC CTGTAAAATC AGCTATTCCT GAAAATATAA GCGAAGATTA TAAAATTCGC
AAATTTTTAA AAGCAAAACT TTATTATGCC GGAATCAATC AAATTTTGAT TGAAAGAACT
GCAAAAAAAC TTCGTGTAAC AATAGTTGCT GCAAGACCTG GTGTAATTAT CGGTAAAAAA
GGTAGCGAAA TAGAAAACCT AAAAAATGAA GTTGTTGCTC TATTAAAAAA AGATGTAACT
ATAAATATAA AAGAAGAAAG AAGACCTGGA AGTTCAGCTC AACTTGCAGC CGAAAATGTT
GCTATGCAAC TTGAAAAACG TGTAGCTTTC AGACGCGCTA TGAAAAAAGT AATTCAAAGT
GCGCAAAAAG CAGGTGCAAA AGGTATTAAA ATTTCAGTTG CAGGCAGACT CGGCGGAGCT
GAAATGGCAA GAACAGAATG GTATTTGGAA GGTCGTGTTC CACTTCATAC TTTAAGAGCA
AAAATTGATT ACGGATTTGC GGAAGCTCAT ACTACTTACG GTAATATCGG TGTAAAAGTA
TGGATTTTCA AAGGCGAAGT TTTACAAAAA GGTATTCAAG CCGAAAAAAC AGACGAAGCG
CCTAAAAAAT CACGCAGATC AAGAAGGGGT AGATAA
|
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| Protein sequence | MGQKVNPIGL RLGINRNWES RWFPVKSAIP ENISEDYKIR KFLKAKLYYA GINQILIERT
AKKLRVTIVA ARPGVIIGKK GSEIENLKNE VVALLKKDVT INIKEERRPG SSAQLAAENV
AMQLEKRVAF RRAMKKVIQS AQKAGAKGIK ISVAGRLGGA EMARTEWYLE GRVPLHTLRA
KIDYGFAEAH TTYGNIGVKV WIFKGEVLQK GIQAEKTDEA PKKSRRSRRG R
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