Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0080 |
Symbol | |
ID | 5408027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 75446 |
End bp | 76747 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640869799 |
Product | putative aminotransferase |
Protein accession | YP_001405693 |
Protein GI | 154149098 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0692072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATAG AAAAAATCAG ACAGAATATA ATTTTAAAAG AGGGTATAAA ATATTTTGAT TGGACAGCTA GCGGACTTGG TTTTTATGAG ATTGAAGATG AAATTTTAAG AATAATGAAA ACCTATTCGA ACACGCATTC GTTGGTTAGC TCAAATTCCA TAAAAACAAC AGATTACTAT GAGAATGCCG TAAAAAAAAT GAAAGAAATT TTAGGCGTAA ATAAGGATTT TTCACTTATT GCATGCGGCT TTGGCGCTAC ATGGGCAATA AAAAGATTTG AAGAAATTTT AGGACTTTAT ATACCGCCTG CGACTCGAGC AAGGCTTGAT TTGCGAAATT TTAAAAACTT GCCGCTTGTA ATAATTTCGC CTTTTGAGCA CCATTCTGTA GAAGTCAGCT TGAGACTTGG ACTTTGTGAA GTCGTGCGAA TTCCGCTAAA CAAAAATGGG CTTTTTGATT TTGATTTTTT TGAAAAAGTC CTTGAAAATG CGCGCGGACG CGAAATTATC GGTATTTTTA ACGTGGCTTC AAATATCAGC GGAATCATAA ACGACTATCA AAAAATATAT TTGATGATAA AAATGTACGG TGGAATCGTG GCATTGGACG GCTCAACTTA CATCACTCAC GGAAAAATTG ATGCAAATTT TTATGACGCA CTTTTTATCT CCACACATAA ATTTCTTGGC GGAATTGGAG CTCCAGGAAT TTTAATAATT AAGAATTCAC TCTTCAAAAG CAATCTGCCT ACATTTGCAG GCGGTGGAAA TGTAAATTAT GTAAGTAGAA CGTCGCAAGA TTTCAAGGTG CAGAAAGAAG AGCTTGAAAC ACCTGGAACC CCTGCAATTT TAGGCGTTAT GAAAGCTTAT TTAGCACTTA AACTTTGGCA CGATGTCGGA GAGAATTTTA TCCAAGAAAC AGAAAACGAA TTGGCGGAAC ATTTTTTAAA CGAAGTAAGT AAGATAAAAG AGCTTAAAAT TTACGGAAAT TTAAATGTTA AACGCGCGCC GATTTTTTCA TTTAACGTAA ACGGTTTTAA TCCTTATGAT TTCGCTTCAA TTTTAAGTCA TAATTTTGAA ATACAAACGC GTGCCGGATG TATGTGTGCA GGACCTTATG CACGCGATTT ACTTGGTTTA ACCGACGATG AAAAAATTTC AAGACCCGGC TTTGTTCGGG TTAGCTTTAA TTTTACTCAG GAGCTAGCCG ATATAGATTT TTTAATCGCC GCAATCAAAG AAATCATAAA AAATAAAGAA AAATTCAACC CGAATTATTT AGTAAAAAGC TGCTGCGGAT AA
|
Protein sequence | MEIEKIRQNI ILKEGIKYFD WTASGLGFYE IEDEILRIMK TYSNTHSLVS SNSIKTTDYY ENAVKKMKEI LGVNKDFSLI ACGFGATWAI KRFEEILGLY IPPATRARLD LRNFKNLPLV IISPFEHHSV EVSLRLGLCE VVRIPLNKNG LFDFDFFEKV LENARGREII GIFNVASNIS GIINDYQKIY LMIKMYGGIV ALDGSTYITH GKIDANFYDA LFISTHKFLG GIGAPGILII KNSLFKSNLP TFAGGGNVNY VSRTSQDFKV QKEELETPGT PAILGVMKAY LALKLWHDVG ENFIQETENE LAEHFLNEVS KIKELKIYGN LNVKRAPIFS FNVNGFNPYD FASILSHNFE IQTRAGCMCA GPYARDLLGL TDDEKISRPG FVRVSFNFTQ ELADIDFLIA AIKEIIKNKE KFNPNYLVKS CCG
|
| |