Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0042 |
Symbol | nifS |
ID | 5409405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 38443 |
End bp | 39633 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640869765 |
Product | NifS family cysteine desulfurase |
Protein accession | YP_001405664 |
Protein GI | 154148303 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS [TIGR03403] cysteine desulfurase, NifS family, epsilon proteobacteria type |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTTT ATTTAGATAA TAACGCTACA ACGATGATAG ACCCTGAAGC AAGAGAGCTT ATGCTGCCTT TTTTGAACGA GAAATTCGGT AATCCGAACT CACTTCATGA TTTTGGCAGC GAAACTCACC CGGCACTCCG TAAGGCTATG GATCAGCTAT ATACTGCACT AAATGCCAAA GATAGCGATG ATATCATAGT TACAAGCTGT GCGACTGAGA GTAATAACTG GGTTTTAAAA GGCATCTATT TTGATAAAAT TATCACCGGT GAAAAAGATA ATATCATTAC TACATCGGTT GAACACCCTG CGATTGGCGA AACATGCAGT TTTTTGGAAA CTCTTGGTGT AAAAATTATT CGTCTTGGCG TAAATACGGA CGGAAATATA AATTTAGACG AATTGAAAGA AAAAATTAAC GATAAAACCG CACTTGTGAG TATAATGTGG GCAAATAATG AAACGGGCAC GATTTTTCCT ATCAGGGAAG CTGCCGAAAT TGCTCACGCT CACGGAGCGC TTTTTCACAC GGACGCTACG CAAGCGGTTG GCAAAATAAA AGTAAATGTT CAAAAAGAAG ATATGGATTT TATGAGTTTT TCAGGGCATA AATTTCATGC GCCAAAGGGC GTAGGTGCGC TTTTTATAAA AGACAGTATT CCGCTTACCA GTTTGCTTCA CGGCGGCGAA CATATGGGAG GACGTAGAAG CGGCACATTA AATGTGGCAG GAATCGTGGC TATGGGAAAA GCTATTGAAA TTGCGGATAA ATTTATAGAC TTTGAAAACT CGCATATTAG ACGTTTGCGT GATAAACTTG AAAATGCTCT GCTTGAAATT CCGGATGTTG GCGTTGTCGG CGATAGAAAA TTTCGCGTTC CAAATACAAT TTTAGCTTCC ATTAAAGGTG TTGAAGGTGA AGCCATGCTT TGGGATTTGA ATAAAGCAGG CATTGCAGCC AGCACCGGTT CGGCCTGTGC CAGTGTTACA CTTAAAAGCA ATCCTATCCT GGAAGCAATC GGCGCGGATA AAGAGTTGGC GCATACGGCG CTTCGTTTGT CACTTTCGCG TTTTAACACG GAAGCTGAGA TTGATTATGC AATTTCTCAT ATCAAATCGG CAATCAACAG ACTTCGTTCT ATTTCAAGTA CATTTGCTTA CGCACCGGAT GGTTATAAAA GCGGATTATA A
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Protein sequence | MRVYLDNNAT TMIDPEAREL MLPFLNEKFG NPNSLHDFGS ETHPALRKAM DQLYTALNAK DSDDIIVTSC ATESNNWVLK GIYFDKIITG EKDNIITTSV EHPAIGETCS FLETLGVKII RLGVNTDGNI NLDELKEKIN DKTALVSIMW ANNETGTIFP IREAAEIAHA HGALFHTDAT QAVGKIKVNV QKEDMDFMSF SGHKFHAPKG VGALFIKDSI PLTSLLHGGE HMGGRRSGTL NVAGIVAMGK AIEIADKFID FENSHIRRLR DKLENALLEI PDVGVVGDRK FRVPNTILAS IKGVEGEAML WDLNKAGIAA STGSACASVT LKSNPILEAI GADKELAHTA LRLSLSRFNT EAEIDYAISH IKSAINRLRS ISSTFAYAPD GYKSGL
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