Gene CHAB381_0018 details

Gene Information

• Locus tag: CHAB381_0018
• Symbol: def
• ID: 5408991
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 18673
• End bp: 19188
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640869741
• Product: peptide deformylase
• Protein accession: YP_001405640
• Protein GI: 154149172
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTTGG AAATTTTGAC ATATCCGAAT AAAAAACTCT ATCAAAAATC AAAAAAAGTA 
GAAAAATTTG ATGACGAACT TGGTAAATTT TTAGATGATA TGTACGAAAC TATGATTTCA 
AAAAAAGGAA TAGGACTTGC TGCAATTCAG GTCGGTCGTC CTATTCGCGC AATTGTAATA 
AATTTAGTCG ATGAAAACGA TGAACAAAAA AAAGAAAATT TACTTGAAAT TATAAATCCT 
GAAATTTTAA CTCAAGAAGG TGAGATAATA TATCAGGAAG GCTGTCTATC GGTTCCAGGA 
TACTATGAAG ATGTAAAAAG AGCCGAATTT GTAAAACTGG GATTTCAAAA CCGTTTCGGT 
GAAACTAAAG AAATGGAAGT TCAAGAGCTT TTAGCTGTTT GTATCCAGCA CGAAATCGAT 
CATCTTGACG GGCATCTGTT TATAGAAAAA ATCGGCTATA ACAAACGAAA AAAATTTGAT 
AAAGAATTTA AAAAACATTT AAAAGAAAAA AAATGA 

 

Protein sequence

MILEILTYPN KKLYQKSKKV EKFDDELGKF LDDMYETMIS KKGIGLAAIQ VGRPIRAIVI 
NLVDENDEQK KENLLEIINP EILTQEGEII YQEGCLSVPG YYEDVKRAEF VKLGFQNRFG 
ETKEMEVQEL LAVCIQHEID HLDGHLFIEK IGYNKRKKFD KEFKKHLKEK K