Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0007 |
Symbol | |
ID | 5408732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 6778 |
End bp | 7995 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640869729 |
Product | hydrolase |
Protein accession | YP_001405629 |
Protein GI | 154148070 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0891222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAAAG CAAGTTTAAT TGAAAAAATT TTCAAAAGTG CTTTTATAAG TCGTTGGAAT GATTATCCAC GCACTTTAAA TTTAGTTGAA CTTGATAAAC AGGCTCATAA GTTTATTATC GCTTATTTTT TGGCAAGTTT TGAAAAAGAT GCCGATTTAC GTTATATAAT TGAAGGCGAA ATTTTTGAAT TTTTATCTCG CATTGTGATT ACCGATATTC GTCCGGATGT ATTTCATCAA ATTCAAAAAA CAAAAAAAAA CGAATTAAAT GGACTTATTT TAGCTCAACT GGAAAAAGAT ATCGATGATA TCGAAGATGG CAAGTTTTTA TGTAGATTCG CCGATTTTTT GCAAAGTAAA GATCATAAAA AAGAGTGCCT TATATTAAAA GCGGCAGGAT ATTTGGCGAC TCGTTGGGAA TTTAATCTTG TTTATAATGC AAGTAAATTT TTAAGCGATA TTGAAGAACT TAAAACAAAT GTCGAAGCCG AACTCGAAGA TTATTACGAA CTTATCGGCG TTAGAAAAAT TGTGATGAAT AAAAAACTTG CCAAAATTAT TGATCTCGGC GGAAGATTAA GATTTCAAAA GCGTTGGACA CAAACGCCGC GTGTGCCTGA AACATCCGTA CTTGGACACA TGCTAATCGT TGCGATTTTG AGTTATTTTT ACTCTCTTGA AGTTAAAGCC TGCGATTCAC GTTTAATTCA TAACTTTTTC TGTGCACTTT TTCATGATTT GCCGGAAAGT CTTACAAGAG ATATTATAAG CCCCGTAAAA TACGGAATAA ACGGCATTGA TGAAATTATC AACGAATATG AAATGCGTCT TATTGATGAA AAAATTTTAC CTTTTGTGCC GGAAAATATA AAAGATGATT TTGCTTATAT TCTCGGAATT AGAAAAATCG AAAATAAATT TGTAAAAAAT GAGTTTGAAA ACCGCATTTT TACGGACGGT GAAGCAAAAT TTAAAGATGG CAGTATGAAT AGTGCAAATA CAAATGAATT AAATGCGATT GACGGTAAAG CAATAAAATT TTGCGATAAA ATCGCCGCAC TTTTTGAAGC CGGAATTTCC ATAAGTTACG GTATAAAAAG CAATGAATTG GTTAAAGCTT ATGAAGGAAT GAATGACTTT TTTGAAAACA ATAAAAGCAT AGAAAACGTA AATTTTAATG AAATTTGTAA GGATTTTAAG GAGTATTTGA ATCTTTAA
|
Protein sequence | MIKASLIEKI FKSAFISRWN DYPRTLNLVE LDKQAHKFII AYFLASFEKD ADLRYIIEGE IFEFLSRIVI TDIRPDVFHQ IQKTKKNELN GLILAQLEKD IDDIEDGKFL CRFADFLQSK DHKKECLILK AAGYLATRWE FNLVYNASKF LSDIEELKTN VEAELEDYYE LIGVRKIVMN KKLAKIIDLG GRLRFQKRWT QTPRVPETSV LGHMLIVAIL SYFYSLEVKA CDSRLIHNFF CALFHDLPES LTRDIISPVK YGINGIDEII NEYEMRLIDE KILPFVPENI KDDFAYILGI RKIENKFVKN EFENRIFTDG EAKFKDGSMN SANTNELNAI DGKAIKFCDK IAALFEAGIS ISYGIKSNEL VKAYEGMNDF FENNKSIENV NFNEICKDFK EYLNL
|
| |