| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0005 |
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| Symbol | |
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| ID | 5408895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 4834 |
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| End bp | 6225 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 24% |
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| IMG OID | 640869727 |
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| Product | putative diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001405627 |
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| Protein GI | 154148235 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.351053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTACA GTGAAAATTT GGAGCGGGAG AATCGTTTTA TTCTTTCGCT TAAAATCGCA
ATTCCATTTA TTCTCATGTT TGCATTTTTT TTCTTTTTTT TCAATATAAA AGATAAAGTT
GCATGGGAAG ATATTATTCT ATTCGTTATT TTATTTTTGT GTAATGTTTA TTATACAGTT
TATCTGATAT ATCTTGGTTT CAACAAAAGT TTAATTGATC CTGTAAGTAA AGTTTTTTCA
CGTCCTGAAA TTATTAAAAT TTTAAGTAAG AGATTAAAAA ACGGCAATCC GGTAAATTTT
GTACTTATGA AAGTGGAAAA TATCGTTGAT ATAAACGATC GTTACGGATA TAAAAACGGC
GATGAAATTT TAAGAATTTT TGCTGAAAAA TTAGATGATT TTATGAAAAA AAATAAAATT
TATCATCTTA AAATAGGTAT GATTACAAGC GGAAATTTTA TATTTTATGT GGATAAAAAA
GAAAATACAT TAAGACATTT ATTAAATATT TTCAAATATG AAATTTTAAA TCAAAATATA
AAAAATATTG AAGTAAAAAG CAATTTTGCA ATTGTAGGAA GCGATTTTGA CAATAATATT
TCAAATATCA TAGATGAATT ATTTTATGAA ATAAATCAAA ATGACAATGA AAAAATAAAT
ATTGTAGATG AACTTGAAAA TTCGATATTT AAGATGATAG ACGAAGAAAA TTTTCATGTA
AGAACGCAAA GCATACAATC TACTTCAAAT GACGAAAAAT TTTTATATCT CATTTCAAAA
ATTTCCACAA ATATAAATGG AATCGGTGAA ATAAGTAAAT CCAGACTTTT AGATGTGATA
TTAAAAAATA AATACGAATT GAATTATGAT GTGAACTTTT TAAAATTCAT TTGCAAAAAT
GTATATTTTA AAGAGATAAA AAATAAGGTT TTTATAGAAA TTTTTGCCTC TACGCTGCGA
AATTCTATTT TTCGTCGTGA AATTTTAAGA TTGATTGACA ATAATTTAAT TGATCCTAAA
AAGGTCGTTT TTGAATTTTA TGAAAGTAAA ATTTACCCTG AAATTTCACG TTTTGCGGAA
ATTATCGAAC AATTCAAATC CTTGGGATTC AGTTTTGCAT TATCACAATT CGGTGGTGAA
AATGCAAGTT TTGAATATTT TAAATATTTA AATATCGATT ATGTTATTTA TGATATGGAA
TTTAATAAAT TTATAAATGA TAACAAAATT CGTCAGATTT TTGAAAATTT AAATAAAACC
TGCAAAATTT TAGGCATAAA AACAATTATG CGTTTTGTCG ATAAAAAACC GCTATTTGAC
GATGTCACTG CACTTGGCGT CGATTATGCG CAAGGATTTT ATATAGATAA ACCAACCGAT
TTAAGGAAAT AA
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| Protein sequence | MLYSENLERE NRFILSLKIA IPFILMFAFF FFFFNIKDKV AWEDIILFVI LFLCNVYYTV
YLIYLGFNKS LIDPVSKVFS RPEIIKILSK RLKNGNPVNF VLMKVENIVD INDRYGYKNG
DEILRIFAEK LDDFMKKNKI YHLKIGMITS GNFIFYVDKK ENTLRHLLNI FKYEILNQNI
KNIEVKSNFA IVGSDFDNNI SNIIDELFYE INQNDNEKIN IVDELENSIF KMIDEENFHV
RTQSIQSTSN DEKFLYLISK ISTNINGIGE ISKSRLLDVI LKNKYELNYD VNFLKFICKN
VYFKEIKNKV FIEIFASTLR NSIFRREILR LIDNNLIDPK KVVFEFYESK IYPEISRFAE
IIEQFKSLGF SFALSQFGGE NASFEYFKYL NIDYVIYDME FNKFINDNKI RQIFENLNKT
CKILGIKTIM RFVDKKPLFD DVTALGVDYA QGFYIDKPTD LRK
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