| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_2081 |
|---|
| Symbol | |
|---|
| ID | 5406930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 1949575 |
|---|
| End bp | 1951110 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640873438 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001409213 |
|---|
| Protein GI | 154175224 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATT TGGCTTCGGT TGACTGGTCT AGGGCTCAGT TCGCGCTAAC CGCGATTTAC
CACTTCATCT TCGTCCCGCT CACGCTGGGG CTTAGCTTCA TCGTCGCGAT AATGGAGAGC
ATCTACGTCA AGACGGGCAG CAAACAATGG CTTGATATAA CGAGGTTTTG GCTCAAGCTC
TTTGGTATAA ATTTCGCTAT CGGCGTGGCC ACCGGCATCA TAATGGAATT TGAGTTTGGC
ACCAACTGGG CGAATTACAG CTGGTTCGTG GGCGACATCT TCGGTGCGCC GCTTGCGATC
GAGGGATTGC TCGCATTTTT CCTAGAGAGC ACATTTTTTG CGGTCATGTT CTTTGGCTGG
AACAAGGTCA GTAAGAAATT TCACCTCGTC TCGACCTGGC TTGTTGCGAT CGGCTCAAAT
TTAAGCGCAC TTTGGATACT CATCGCAAAT GGCTGGATGC AGTATCCAAT AGGCATGAAA
TTCAACCCCG ATACCGCCAG GATGGAGATG CAAAATTTCC TAGACGTCGC GCTAAATCCG
GTCGGCATCA TAAAATTCCT ACACACCGTC ACTAGCGGAT ACTCTATCGC GGCGCTTTTT
GTGATCGGAA TTTCAGCTTG GTTTTTGCTG AAAGGACGCA ACGTCGTGAT GGCTAAAAAA
AGCATCGTCG TAGCGGCTAG CTTTGGGCTG ATAACGTCTG TATTTTTGCT ATTTAGCGGC
GATGAGAGCG CGTATCAAGC TGCAAACAAA CAGCCTATGA AGCTAGCTGC GATGGAGGGG
CTTTATAAAG GCCAGACAAA TGCCGGCCTC GTAGCGATGG GAATTTTAAA CCCTAGCAAA
AAAGCAGGCG ATGATAAAGA GGCGTTTTTG CTCGAGCTAA AAGTGCCTTA TGCGCTTGGA
CTCATGGCTA CTAGAGGCAT AAACAACTTC ACTCCCGGCA TCGACGACAT CATCTACGGT
AACGAAAAAG AGGGCATCGA AAGCGCAGCC AGCAAGATGG AAAAAGGCAG GCTCGCAGTA
GATGCTTTAA GAGCCTACAA AGATGCCAAA AAAGCGGGCG ATGAGAGCGT GATGGCAAGC
TCAAAGCAAA CTTTGGAGCA AAATTTAAAA TTCTTAGGCT ACGGCTACAT CAAAAATGTC
GAGGATCTCG TGCCTCACGT TGGGCTCACG TTTTATAGCT TTCACGTGAT GGTCGCACTT
GGCACTTATT TTATCGCACT ATTTGCGCTG ACTTTGTTTA TGTGCCTTTC AAGCAAATTT
GACATCGTAA ATTTCAAAAA GCTACTTTGG CTATGCGTAT TTACCATACC GCTTGGCTTC
GTGGCGGCTG AGGCCGGCTG GATAGTGGCC GAGGTCGGGC GTCAGCCTTG GGTCATACAA
GATCTCATGA CCGTGGGCGT AGGAGCTACG AATTTAGCCG ATACGAACAT CAAAATTTCA
GTTGCGTTGT TTACGATACT CTTTACCGTG CTTCTCATCG CCGAAGTCAA AATCATGCTA
AAGCAAATAA AGATAGGATT TGAAAACCAT GCATAG
|
|---|
| Protein sequence | MSDLASVDWS RAQFALTAIY HFIFVPLTLG LSFIVAIMES IYVKTGSKQW LDITRFWLKL
FGINFAIGVA TGIIMEFEFG TNWANYSWFV GDIFGAPLAI EGLLAFFLES TFFAVMFFGW
NKVSKKFHLV STWLVAIGSN LSALWILIAN GWMQYPIGMK FNPDTARMEM QNFLDVALNP
VGIIKFLHTV TSGYSIAALF VIGISAWFLL KGRNVVMAKK SIVVAASFGL ITSVFLLFSG
DESAYQAANK QPMKLAAMEG LYKGQTNAGL VAMGILNPSK KAGDDKEAFL LELKVPYALG
LMATRGINNF TPGIDDIIYG NEKEGIESAA SKMEKGRLAV DALRAYKDAK KAGDESVMAS
SKQTLEQNLK FLGYGYIKNV EDLVPHVGLT FYSFHVMVAL GTYFIALFAL TLFMCLSSKF
DIVNFKKLLW LCVFTIPLGF VAAEAGWIVA EVGRQPWVIQ DLMTVGVGAT NLADTNIKIS
VALFTILFTV LLIAEVKIML KQIKIGFENH A
|
|---|
| |