Gene CCC13826_1759 details

Gene Information

• Locus tag: CCC13826_1759
• Symbol: rpsE
• ID: 5595935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: -
• Start bp: 1892371
• End bp: 1892814
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640930433
• Product: 30S ribosomal protein S5
• Protein accession: YP_001467703
• Protein GI: 157164159
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00134618
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAT ATAATAGAGA AGAATTTGAA GAAGTAATCG TCGATATCGG TCGGGTTACA 
AAGGTTGTTA AAGGTGGTCG TAGATTTAGA TTTACAGCTT TAGTTGTTGT TGGTAATAGA 
AATGGTCTAG TTGGCTTTGG ATATGGCAAA GCTAAAGAGG TGCCAGATGC GATGAGAAAA 
GCGATTGATG ACGCATTTAA AAATATTATC CACGTTAAGA TCAAGGGCAC AACTATCCCT 
CACGATGTAG AGGTAAAATA CAACGCAAGT AGAATGCTAC TTCGCCCAGC TAGCGAAGGT 
ACTGGTGTTA TCGCAGGTGG TAGTGCACGT CCTATTATCG AGCTTGCAGG TATTAAGGAT 
ATCCTTACTA AATCACTTGG CTCAAACAAC TCAGCAAACG TCGTTCGTGC TACTATAAAA 
GCACTTAGTT TGCTAAAAAG CTAA 

 

Protein sequence

MEKYNREEFE EVIVDIGRVT KVVKGGRRFR FTALVVVGNR NGLVGFGYGK AKEVPDAMRK 
AIDDAFKNII HVKIKGTTIP HDVEVKYNAS RMLLRPASEG TGVIAGGSAR PIIELAGIKD 
ILTKSLGSNN SANVVRATIK ALSLLKS