Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1506 |
Symbol | |
ID | 5597573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 488300 |
End bp | 488809 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640929077 |
Product | triosephosphate isomerase (TIM; Triose-phosphateisomerase) |
Protein accession | YP_001466385 |
Protein GI | 157164623 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA TTGAGAGATT TTTTGACAAA GCTGGTGATA TAGTCGGCTA TATTTGTATG TTTATTATGG CTTTGATGAT AATAGACGTA TTTTTTAACG TTGTGGCAAG ATACTTTTTC TCTTACGGCA ACGTTGCATT TCAGGAGCTT GAGTGGCACT TTTTTGCTGT GATATTTCTA CTTGGCATGA GCTATGCTCT AAAAGAGGAC GCACATGTTA GAGTTGATAT CTTTTATGCT AAATTTTCAG AAAGAAATAA AGCCCTTGTA AATATGCTTG GCACTGTATT TTTTATCATA CCATTTGCGC TTTTGGTTTC AAATTTATCA TTTGGATTTG TAGGAGATGC TTATAGCTCG GCAGAGGCCA GTGCAGATCC AGGCGGTCTT ACCCATAGGT GGATCATAAA AGCAATGATC CCTTTTTCAT TTTATGTGCT TGTATTTTTT GCGATTGGCT TTTTTATAAG AAATTTCAAT CTTTATAAAA AAGCTAAAAA GGGGGAATAA
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Protein sequence | MDKIERFFDK AGDIVGYICM FIMALMIIDV FFNVVARYFF SYGNVAFQEL EWHFFAVIFL LGMSYALKED AHVRVDIFYA KFSERNKALV NMLGTVFFII PFALLVSNLS FGFVGDAYSS AEASADPGGL THRWIIKAMI PFSFYVLVFF AIGFFIRNFN LYKKAKKGE
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