Gene CCC13826_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_1506 
Symbol 
ID5597573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp488300 
End bp488809 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content35% 
IMG OID640929077 
Producttriosephosphate isomerase (TIM; Triose-phosphateisomerase) 
Protein accessionYP_001466385 
Protein GI157164623 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA TTGAGAGATT TTTTGACAAA GCTGGTGATA TAGTCGGCTA TATTTGTATG 
TTTATTATGG CTTTGATGAT AATAGACGTA TTTTTTAACG TTGTGGCAAG ATACTTTTTC
TCTTACGGCA ACGTTGCATT TCAGGAGCTT GAGTGGCACT TTTTTGCTGT GATATTTCTA
CTTGGCATGA GCTATGCTCT AAAAGAGGAC GCACATGTTA GAGTTGATAT CTTTTATGCT
AAATTTTCAG AAAGAAATAA AGCCCTTGTA AATATGCTTG GCACTGTATT TTTTATCATA
CCATTTGCGC TTTTGGTTTC AAATTTATCA TTTGGATTTG TAGGAGATGC TTATAGCTCG
GCAGAGGCCA GTGCAGATCC AGGCGGTCTT ACCCATAGGT GGATCATAAA AGCAATGATC
CCTTTTTCAT TTTATGTGCT TGTATTTTTT GCGATTGGCT TTTTTATAAG AAATTTCAAT
CTTTATAAAA AAGCTAAAAA GGGGGAATAA
 
Protein sequence
MDKIERFFDK AGDIVGYICM FIMALMIIDV FFNVVARYFF SYGNVAFQEL EWHFFAVIFL 
LGMSYALKED AHVRVDIFYA KFSERNKALV NMLGTVFFII PFALLVSNLS FGFVGDAYSS
AEASADPGGL THRWIIKAMI PFSFYVLVFF AIGFFIRNFN LYKKAKKGE