| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0093 |
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| Symbol | tgt |
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| ID | 5596725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 886174 |
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| End bp | 887304 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640929452 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001466747 |
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| Protein GI | 157164323 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0899534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTG AAGTTATAAA AAAAGATGGC AACGCAAGGC GCGGCATCCT AACAACCGCT
CACAGCGTGA TACAAACGCC AGTTTTCATG CCAGTTGGCA CTGTTGGCGC AGTTAAAAGC
CTAGACGCCT TTGATATGAG TGAAATTTTA GACGCAAAGA TAATTTTAGC AAACACCTAC
CACATGTATC TGCGCCCTGG CAGCAAGGTC GTGCGTGAGT TTGGCGGACT TCACGGGTTT
TCTAAATTTG ATCGCTCGTT TTTAACTGAT AGCGGCGGAT TTCAGGCATT TTCTCTTAGG
TCAAATACCA AAAACGACGA TGGCGGGATA AAATTTAAAA GCCACATCGA CGGCAGCACG
CACTACTTCA CTCCAAGGTC CGTCCTTGAT ACGCAGTATG AGCTTGGCAG CGACATAATG
ATGATACTTG ATGATCTAGT CGCCTTGCCA GCTGAGCCAA AAAGGATAGA TCTCAGCATA
AAGCGAACGA TAAAATGGGC AAAAGAGGCG ATTGATTATC ACAAATTTAT GCAAAGCAAG
GGCGTTGGCT TGCAGCAAAA TATCTTTGGC ATCGTCCAAG GTGGCACCGA CTATGAGGCA
CGTAAATTTT GCGCCGAGGC ACTAAACGAG ATGCCATTTG ACGGCCTTGC GATCGGCGGT
CTAAGCGTTG GCGAGAGCAA CGAGGCGATG TATGACACGG TTGAGGCGGT TATGCCGTTT
ATGGATGAGC TTAGACCACG CTATCTAATG GGCGTTGGCA CACCTGAAGA CCTTGTTGAA
AACGTAGAGC GAGGCGTTGA TATGTTTGAC TGCGTCATGC CAACTAGAAA CGCAAGAAAT
GGCACGCTAT TTACTAGCTT TGGCAAGATA AATATAAAAT CAGCCAAATT TATAAACGAC
CACGCGCCGA TAGATCCGCA GTGTCAGTGC TATACCTGCA AGCGTTACTC CAGAGGCTAT
CTAAACCACC TTTTTAAGGC TAGAGAGCTA ACGTTTTTTA GACTAGCAAG CCTTCACAAC
CTGCACTACT ATCTAAATTT GATGAAAGAG ATGAGAGAGG CGATCGAGGT CGGCGAATTT
GCTAAATTTA AGCGAAATTT CTACGCAAAA AGGAGCACAG ATGAGCTATA A
|
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| Protein sequence | MKFEVIKKDG NARRGILTTA HSVIQTPVFM PVGTVGAVKS LDAFDMSEIL DAKIILANTY
HMYLRPGSKV VREFGGLHGF SKFDRSFLTD SGGFQAFSLR SNTKNDDGGI KFKSHIDGST
HYFTPRSVLD TQYELGSDIM MILDDLVALP AEPKRIDLSI KRTIKWAKEA IDYHKFMQSK
GVGLQQNIFG IVQGGTDYEA RKFCAEALNE MPFDGLAIGG LSVGESNEAM YDTVEAVMPF
MDELRPRYLM GVGTPEDLVE NVERGVDMFD CVMPTRNARN GTLFTSFGKI NIKSAKFIND
HAPIDPQCQC YTCKRYSRGY LNHLFKAREL TFFRLASLHN LHYYLNLMKE MREAIEVGEF
AKFKRNFYAK RSTDEL
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