Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_0990 |
Symbol | alaS |
ID | 5459344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | + |
Start bp | 971798 |
End bp | 974395 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001424370 |
Protein GI | 154706669 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGTA ATCAATTACG AGAAACCTTC CTGAATTATT TTAAACAATT GGATCATGAA GTTGTTCCAG GTAGTTCATT AATACCGGAA AATGACCCGA CGCTATTGTT CACTAATGCG GGAATGGTGC AATTTAAAGA TGTTTTTTTG GGTGTCGAAA CACGACCTTA TCAGCGCGCC GTTTCGATAC AACCTTGCAT GCGAGCCGGC GGAAAGCACA ATGATTTAGA GAACGTTGGC TACACGGCCC GCCATCACAC CTTTTTTGAA ATGCTGGGGA ATTTTAGTTT TGGTGATTAT TTTAAACGCG ATGCTATTAA ATTTGCATGG GATTTTTTGA CTAATGTTTT AAAGCTCCCG CCCCAACGAT TGTGGGTGAC GGTATTTCAG GATGACTTTG AGAGTGAGTC CATATGGCTT AAGGAAATGA AAATAAATCC AGAGCGGTTC TCGCGTTGCG GGGAAAAAGA CAATTTCTGG CAAATGAGGG ACACTGGGCC TTGCGGGCCG TGTACAGAAA TATTTTATGA CCACGGGCCA ACTATCTCGG GAGGCCCACC GGGAAGCGCA GAGGCAGATG GCGACCGCTA TGTGGAAATT TGGAATTTAG TATTTATGCA GTACAACCGC GACGCAAAGG GAAATCTGCT CCCTCTTGCA AAGCCGAGCG TAGACACAGG GATGGGTCTA GAACGCCTGG CGGCTGTTAT GCAGGGCGTC CATGACAATT ACGATATCGA TTTATTTCAG TATTTATTGA AAGCGTTAAG AACGCTTCTT AAGACCGAGG ATCTTCACAA TACGTCGATG CGGGTGATTG TGGATCATAT TCGCTCGGTT GCTTTCCTTA TTGCCGATGG AGTGATCCCG TCTAACGAAG GGCGGGGTTA CGTTCTGCGT CGTATTATTC GCCGGGCCGT TCGTCATGGG TATAAACTGG GGCAAGAGGA ACCTTTTTTC TATCAGTTAA CTAAACCGTT GGTAGAAGAG ATGGGAGGCG CCTATCCTTT GCTTCGTAAA TCCCAAGCTC TGATCGAGCA AACCATCAAG CAGGAAGAAA TACAATTTTC TAATACCTTA ACAAAAGGTC TTAAGATTTT AGATCATGAA ATGGCTGGCT TACCTTCCCG CCAAATTCCA GGCAATCTAA TTTTTCAATT ATATGACACT TATGGATTCC CGCCTGACTT GACGGCTGAT ATTGCAAGAG AGCGTGATTT TGTGATGGAT TATGCAGGGT TCGATAAAGC CATGGAACGT CAGCGTGAAC AATCGCAGCA AGCGCATCAA TTCGTAGCTA ATTATGCCCA AAAAGCATCT ATTGGTGGCG AAACGCAATT CGTGGGCTAT GAAACGTTAA ATTCGCAAGC GAACGTAATT TCTTTGCTGC AGAATGATCA GCCTATTAAC CGATTAAATG AAAGCGAAAA AGGGGTGGTA GTACTGGATC GCACCCCTTT TTATGCAGAA TCGGGAGGTC AAGTCGGCGA TCAAGGGTTT TTATATTTTG AAAAAGGCAG TTTTCGTGTT AAGGATACTA AAAAACAAGG TGATATTTAT TTACATATTG GCGAGATGTT ACAAGGTCAT TTAAATGTAA AAGATAAAGT TCGCGCCGAA GTCGATGTGT CGCGTTTTGA TATTATGCGT AACCACTCCG CCACACATTT GCTTCACGAA GCCTTGCGCC GCGTGCTTGG CGAGCGCGTG ATGCAAAAGG GCTCTCTGGT TGAAGCAAAG CGTTTACGAT TTGATTTTTC TCATGCTAAA CCGCTTACGC CAGAAGAATT GCAGGCAGTC GAAAGATTGG TTAATCAACA AATCCAAGCG AATTTGCTTT CCACCATCGA AGTAATGACC CCAGAAGAGG CGAAGAAAAA AGGTGCGTTG GCTTTATTTG GAGAACGGTA CGGCAAAGAG GTCCGTGTAC TCGAAATGGG TGATTTTTCT ACTGAAATTT GCGGCGGAAC CCATACAGAA CGAACGGGGG AAATTGGTTT ATTTAAGATT GTCTCTGAAT CCGGTTGCGC GGCGGGCATT CGACGCATTG AAGCGCTCAC TGGTAAGGCT GCGCTAGACT ATATTGAATC CGCAGAGCAA CAATTACGTT CGCTCAGCGA TTTATTAAAA ACGAACCGTA AAAATTTAGC GGCAAAATTA AGCCAAATTT TAGAAGACCA CCGCAAATTG GAAAAAGAAC TTGCGAAATT AAAACAGCGG CTGGCGAGTC AACAACTTGA AAGCTTAATT AATCAAGTAG TGGATGTACA TGACATAAGA ACGCTCGCTA TTCGATTAGA AGCCGTTGAC CGAGAGACAC TGCGAGCTAT CGTCGATCAA TTAAAACAAA AATTGGGAAA GGCTGCGATT GTATTAGCGA CGATAGAAGA AGGGCGCATA CAACTAGTAG CGGGAGTCAC CAAAAATTGT TTGGAGCATT TTAATGCGAC AGAACTACTG GCGCCGATAG CCGAAAAGGT TGGTGGCCGC AGCGGGGGCC GCCCCGATTT AGCTCAAGGA GCAGGAGAAA GGCCGGAGAA TTTAGAAGCG GCACTGGCAG CGGTGCCCAA ATGGATTGAG AAAAAACTAA AGGAATAG
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Protein sequence | MNSNQLRETF LNYFKQLDHE VVPGSSLIPE NDPTLLFTNA GMVQFKDVFL GVETRPYQRA VSIQPCMRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKRDAIKFAW DFLTNVLKLP PQRLWVTVFQ DDFESESIWL KEMKINPERF SRCGEKDNFW QMRDTGPCGP CTEIFYDHGP TISGGPPGSA EADGDRYVEI WNLVFMQYNR DAKGNLLPLA KPSVDTGMGL ERLAAVMQGV HDNYDIDLFQ YLLKALRTLL KTEDLHNTSM RVIVDHIRSV AFLIADGVIP SNEGRGYVLR RIIRRAVRHG YKLGQEEPFF YQLTKPLVEE MGGAYPLLRK SQALIEQTIK QEEIQFSNTL TKGLKILDHE MAGLPSRQIP GNLIFQLYDT YGFPPDLTAD IARERDFVMD YAGFDKAMER QREQSQQAHQ FVANYAQKAS IGGETQFVGY ETLNSQANVI SLLQNDQPIN RLNESEKGVV VLDRTPFYAE SGGQVGDQGF LYFEKGSFRV KDTKKQGDIY LHIGEMLQGH LNVKDKVRAE VDVSRFDIMR NHSATHLLHE ALRRVLGERV MQKGSLVEAK RLRFDFSHAK PLTPEELQAV ERLVNQQIQA NLLSTIEVMT PEEAKKKGAL ALFGERYGKE VRVLEMGDFS TEICGGTHTE RTGEIGLFKI VSESGCAAGI RRIEALTGKA ALDYIESAEQ QLRSLSDLLK TNRKNLAAKL SQILEDHRKL EKELAKLKQR LASQQLESLI NQVVDVHDIR TLAIRLEAVD RETLRAIVDQ LKQKLGKAAI VLATIEEGRI QLVAGVTKNC LEHFNATELL APIAEKVGGR SGGRPDLAQG AGERPENLEA ALAAVPKWIE KKLKE
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