Gene CA2559_06730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_06730 
Symbol 
ID9296842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand- 
Start bp1497430 
End bp1498164 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content31% 
IMG OID 
Productshikimate 5-dehydrogenase 
Protein accessionYP_003716105 
Protein GI298207926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACTC GTAAATTCGG ATTATTAGGA AAAGATATAG ACTACTCATT TTCAAGAGGC 
TATTTTTCTG AAAAATTTAA AGCTGAAGAT TTAAATGCTA CCTATGAAAA TTTTGATTTT 
CAAAACATAG AATTGGTAAC AACTATACTA AATCCTAGTG CTCAAATTTC TGGTATAAAT 
ATCACAATTC CCTATAAAGA AAGTATAATA CCTTACTTAG ATGAATTACA GGAAGATGCT 
GTAAACATTG GTGCTGTAAA CACTGTTAAA TTTGAAGACG GTAAAAGTAT TGGCCATAAC 
ACAGACTTTT ATGGTTTTAC TAAAGCTTTA AAACCACACC TAAAAGCACA CCATAAAAAG 
GCTTTAATAC TAGGTACTGG CGGCGCATCA AAAGCTATTG CTTATAGCTT AAAAAAGCTA 
GGTATTAATT ATGTTTTTGT GTCTAGAAAT CCAGATTTTA ATGAAATGAG CTATCATAAT 
CTAGACGAAG ATATTGTTAG AGATTATACA TTAATTATTA ACTGCACACC GTTAGGAACG 
CATCCTAATA TTCAACAAAA ACCTCAGATA CCTTATGAGG GTATTTCAGA GAAACATATA 
ATGTTCGATC TTATTTACAA TCCTTCAGAA ACAGCATTTC TTAAACAAGG AAAATCTAAA 
GGAGCAACGA TAGTAAACGG ACTTAAAATG CTAGAGTTCC AAGCAGAAAA ATCTTGGGAA 
ATTTGGAATA GCTAG
 
Protein sequence
MKTRKFGLLG KDIDYSFSRG YFSEKFKAED LNATYENFDF QNIELVTTIL NPSAQISGIN 
ITIPYKESII PYLDELQEDA VNIGAVNTVK FEDGKSIGHN TDFYGFTKAL KPHLKAHHKK 
ALILGTGGAS KAIAYSLKKL GINYVFVSRN PDFNEMSYHN LDEDIVRDYT LIINCTPLGT 
HPNIQQKPQI PYEGISEKHI MFDLIYNPSE TAFLKQGKSK GATIVNGLKM LEFQAEKSWE 
IWNS