Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3208 |
Symbol | |
ID | 4014132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3393300 |
End bp | 3393947 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637942875 |
Product | DedA protein (DSG-1 protein) |
Protein accession | YP_550020 |
Protein GI | 91789068 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.043821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC TAACTTATCT GATGGATTTC ATTCTCCACG TGGACAAACA CCTGGAAACC TTTGTCACGA GCTACGGCAC CTGGGTTTAC GCGCTGCTGT TTCTCATTAT TTTTGTGGAA ACCGGCGTGG TCGTCATGCC ATTTCTGCCC GGCGACTCGC TGCTGTTTGT GGTCGGCGCG ATGTGCGGCG TGGGCCTGAT GAGCTATCCG CTGACGCTGG GGCTGCTGTT TGCGGCAGCG GTGCTGGGCA ACCAGTCCAA TTACGCCATC GGCAACTACT TCGGCCCCAA GGTGTTCCAG TGGGAAGATT CAAAATTTTT CAATAAAAAG GCGTTTAACC AGGCTCACGA GTTCTACGAG CGTTACGGCG GGATCACCAT TGTGGCGGCG CGTTTCATGC CCTTTTTACG GACTTTTGCC CCGTTTGTGG CCGGTGTGTC GCAAATGACG CGCAGCAAAT TCACGCTGTA CGACATCACA GGCGGCGCGC TCTGGGTCGG CGGCATCGTC ACGGCGGGCT ACTTTTTCGG CAACGTCCCC TTTGTCAAGG CGAACCTGGA CAAGATCATC TGGGCGATGA TTTTGATTCC GGGCCTGTTC GTCCTGTTTG GCGCGTGGAA GGCCCGGCGC CAGGCGCGGC AGGCCTGA
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Protein sequence | MELLTYLMDF ILHVDKHLET FVTSYGTWVY ALLFLIIFVE TGVVVMPFLP GDSLLFVVGA MCGVGLMSYP LTLGLLFAAA VLGNQSNYAI GNYFGPKVFQ WEDSKFFNKK AFNQAHEFYE RYGGITIVAA RFMPFLRTFA PFVAGVSQMT RSKFTLYDIT GGALWVGGIV TAGYFFGNVP FVKANLDKII WAMILIPGLF VLFGAWKARR QARQA
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