Gene Bpro_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1664 
Symbol 
ID4015683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1716097 
End bp1717458 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content65% 
IMG OID637941336 
ProductType I secretion outer membrane protein, TolC 
Protein accessionYP_548498 
Protein GI91787546 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CCAAGAAACT TCAGGCGCCA GCGGTGCCTC CTGTGATAGC GCCCCTGTCG 
ATGGCGATTG CCCTGGCGCT GATGGCTGTT GCCCAGCAGG CACAGGCCCA GAGTCTGGTG
GAACTGTATG AATCGGCCCG TGCATTTGAC GCAAGCTACC AGTCGGCCCG GCTGCAATAC
GACGCCAACC TGGCCAGGGC CGAACAGGCC AAGGCCGGCA TCCTGCCAAC GGCGGGCCTG
GCCGCGGGAG CCTCCCGCAC CGGCTTCGAA AACACCAACC CGGTGGTCGA CCGCAGCTTC
AACACGCAAA ACGCCACGCT GACGGCCACG CAGCCGCTGT ACCGGCCCCA GAACTGGGCC
ACCTACGAGC AGGGCGCCCG GCAGGTAGAC CAGGCAAAGG CACAGCTTGA GACCGCCGAA
CAGGACCTGA TCGTGCGCAC CAGCCAGGCT TACTTTGATG TGCTGGCCGC GCAGGACACG
CTGGCCTTTG TGCAGGCACA AAAGGCCGCG GTGGCCGAGC AGCTGGCCTC GGCCAAGCGC
AACTTCGAGG TGGGCACCTC CACCATCACC GACACCCGCG AAGCGCAGGC CCGCTACGAC
CTGGTGATTG CCCAGGAGAT CGCCGCCGAG AACGACCTGC GCGTCAAGAA AATCGCGCTG
GACCAGCTCG TCGGCAAAAC CGAATCACAG CCCAAGGGCC TGCTGGCTCC GGTGAATTTG
CCGCCGGTGG TGCCGGCAGA TGTCAATACC TGGGTGCAGC AGTCCGAAGC GGTGCACCCC
GGCATTCGCC TGGCGCAAAG CGGGCTGGAC ATTGCCGAAC TCGAAGTCAA AAAAGCCGAA
GCCGGCCACA AGCCCACGCT AGACGCCACC GCCAGCTACA ACGTCACGCG CAACCCCTCA
GGCACCACGC AAACCGCCCT GTCCACACGT ACCAACACCA GCACTGTCGG CCTGCTGCTC
AATGTCCCGC TGTTTGCCGG CTTTGCCACG CAAAACCGCG TGAAGGAAAC GCTCGCGCTG
AAAGACAAGG CACGCAGCGA CCTCGATGGC GCACGGCGCA CCGTGGCCCA GAGCACGCGC
ACCGCCTACT TTGGCGTGCT GTCCGGCCAG GGGCAGGTCA AGGCCCTGGA GGCGGCCGAG
CTGTCCAGCC AGAGCGCGCT GGACGCCAAC AAGCTGGGCT ACCAGGTGGG CGTGCGCATC
AACATCGACG TGCTCAATGC GCAAAGCCAG CTGTTCCAGA CCAAGCGCGA CCTGGCCCAG
GCGCGCTACA ACGTGCTGCT GGGCGGCCTG CGCCTGCGGC AAGCCAACGG CACCTTGACG
CCAGAGGACT TGCGGCAGAT CAACGGGCTG CTGGTCAAAT AG
 
Protein sequence
MTTPKKLQAP AVPPVIAPLS MAIALALMAV AQQAQAQSLV ELYESARAFD ASYQSARLQY 
DANLARAEQA KAGILPTAGL AAGASRTGFE NTNPVVDRSF NTQNATLTAT QPLYRPQNWA
TYEQGARQVD QAKAQLETAE QDLIVRTSQA YFDVLAAQDT LAFVQAQKAA VAEQLASAKR
NFEVGTSTIT DTREAQARYD LVIAQEIAAE NDLRVKKIAL DQLVGKTESQ PKGLLAPVNL
PPVVPADVNT WVQQSEAVHP GIRLAQSGLD IAELEVKKAE AGHKPTLDAT ASYNVTRNPS
GTTQTALSTR TNTSTVGLLL NVPLFAGFAT QNRVKETLAL KDKARSDLDG ARRTVAQSTR
TAYFGVLSGQ GQVKALEAAE LSSQSALDAN KLGYQVGVRI NIDVLNAQSQ LFQTKRDLAQ
ARYNVLLGGL RLRQANGTLT PEDLRQINGL LVK