Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1664 |
Symbol | |
ID | 4015683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1716097 |
End bp | 1717458 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637941336 |
Product | Type I secretion outer membrane protein, TolC |
Protein accession | YP_548498 |
Protein GI | 91787546 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC CCAAGAAACT TCAGGCGCCA GCGGTGCCTC CTGTGATAGC GCCCCTGTCG ATGGCGATTG CCCTGGCGCT GATGGCTGTT GCCCAGCAGG CACAGGCCCA GAGTCTGGTG GAACTGTATG AATCGGCCCG TGCATTTGAC GCAAGCTACC AGTCGGCCCG GCTGCAATAC GACGCCAACC TGGCCAGGGC CGAACAGGCC AAGGCCGGCA TCCTGCCAAC GGCGGGCCTG GCCGCGGGAG CCTCCCGCAC CGGCTTCGAA AACACCAACC CGGTGGTCGA CCGCAGCTTC AACACGCAAA ACGCCACGCT GACGGCCACG CAGCCGCTGT ACCGGCCCCA GAACTGGGCC ACCTACGAGC AGGGCGCCCG GCAGGTAGAC CAGGCAAAGG CACAGCTTGA GACCGCCGAA CAGGACCTGA TCGTGCGCAC CAGCCAGGCT TACTTTGATG TGCTGGCCGC GCAGGACACG CTGGCCTTTG TGCAGGCACA AAAGGCCGCG GTGGCCGAGC AGCTGGCCTC GGCCAAGCGC AACTTCGAGG TGGGCACCTC CACCATCACC GACACCCGCG AAGCGCAGGC CCGCTACGAC CTGGTGATTG CCCAGGAGAT CGCCGCCGAG AACGACCTGC GCGTCAAGAA AATCGCGCTG GACCAGCTCG TCGGCAAAAC CGAATCACAG CCCAAGGGCC TGCTGGCTCC GGTGAATTTG CCGCCGGTGG TGCCGGCAGA TGTCAATACC TGGGTGCAGC AGTCCGAAGC GGTGCACCCC GGCATTCGCC TGGCGCAAAG CGGGCTGGAC ATTGCCGAAC TCGAAGTCAA AAAAGCCGAA GCCGGCCACA AGCCCACGCT AGACGCCACC GCCAGCTACA ACGTCACGCG CAACCCCTCA GGCACCACGC AAACCGCCCT GTCCACACGT ACCAACACCA GCACTGTCGG CCTGCTGCTC AATGTCCCGC TGTTTGCCGG CTTTGCCACG CAAAACCGCG TGAAGGAAAC GCTCGCGCTG AAAGACAAGG CACGCAGCGA CCTCGATGGC GCACGGCGCA CCGTGGCCCA GAGCACGCGC ACCGCCTACT TTGGCGTGCT GTCCGGCCAG GGGCAGGTCA AGGCCCTGGA GGCGGCCGAG CTGTCCAGCC AGAGCGCGCT GGACGCCAAC AAGCTGGGCT ACCAGGTGGG CGTGCGCATC AACATCGACG TGCTCAATGC GCAAAGCCAG CTGTTCCAGA CCAAGCGCGA CCTGGCCCAG GCGCGCTACA ACGTGCTGCT GGGCGGCCTG CGCCTGCGGC AAGCCAACGG CACCTTGACG CCAGAGGACT TGCGGCAGAT CAACGGGCTG CTGGTCAAAT AG
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Protein sequence | MTTPKKLQAP AVPPVIAPLS MAIALALMAV AQQAQAQSLV ELYESARAFD ASYQSARLQY DANLARAEQA KAGILPTAGL AAGASRTGFE NTNPVVDRSF NTQNATLTAT QPLYRPQNWA TYEQGARQVD QAKAQLETAE QDLIVRTSQA YFDVLAAQDT LAFVQAQKAA VAEQLASAKR NFEVGTSTIT DTREAQARYD LVIAQEIAAE NDLRVKKIAL DQLVGKTESQ PKGLLAPVNL PPVVPADVNT WVQQSEAVHP GIRLAQSGLD IAELEVKKAE AGHKPTLDAT ASYNVTRNPS GTTQTALSTR TNTSTVGLLL NVPLFAGFAT QNRVKETLAL KDKARSDLDG ARRTVAQSTR TAYFGVLSGQ GQVKALEAAE LSSQSALDAN KLGYQVGVRI NIDVLNAQSQ LFQTKRDLAQ ARYNVLLGGL RLRQANGTLT PEDLRQINGL LVK
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