| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6876 |
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| Symbol | |
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| ID | 6279963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3236902 |
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| End bp | 3238806 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617903 |
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| Product | FHA domain containing protein |
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| Protein accession | YP_001890539 |
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| Protein GI | 187921507 |
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| COG category | [T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1716] FOG: FHA domain
[COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.4951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.233177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAATC TTCAGATACA CCCGCGCAAT GCACCCGTCA CCTCGCTTCA GGTCGAGCAG
GGTTGCACGA TCGGTAAGGA CGCGAGCTGC GACGTCATAG TTAAAGGCAT GCTGATCGGC
AAGCTGCAGG CGCGCATCGT CAGAGAGAAC AACGCCTATT ACATCGAAGA CCAGGGCGGC
ATTGCAGCCA CGCTCGTCAA CGGCTCACCG ATCACGCGTT ACGGTCCGTT GACGGAAGCC
GACCAGATCG AGATCGGCGT GACCACGATC AAAATCGTGC GAGCGGCGGC CACGACGCAA
TCGGCGCAAT CGGCGCACCA CGCCGCGCAG CCTTCACAAG TGGCGGCGCA GGCGCCCATT
TCGTTGTCAG CCGCGCCCTC GGCACAGGCC AGCGGGCCGG CGCAATTCGG CTCGTCGTTC
GTATCCGAGG CTCAGGCGCC GTCGCCGACC GCGGCGCCCT ACGCGCAAGC CATGGCACCC
ATTGCCGAGT CAATCGACCG GTCCGTTGCT ATGGTGCGTG AGAGCGCGGT CGCGCCCAGC
AAGCCGGCGG CCGAAGCGCC GCTGCGCATG CATTCCGCGC AGGTGAAAAA AACAGCCGCT
GAATCCTTGC CCGTGGCGCC GATCAATAGC CCGGTCGGCA TCGAGCTGCG CAAGCAGGCG
CACATGAAAG TGATCGCGGC ACTCGACCTG CGCCGCCTGA ACGTCGCGCG CATGGAAGAG
GACGATTTGC GCAAGACCGT GAGCGCCGCG CTCGACGACA TCCTCAATCA CGATGCCAGC
TTCCGGTCGC CGGATATCGC ACTGGAAACG TTGAAGAAGA GCGTGTTCGA CGAAATCATC
GGGCTCGGGC CGCTCGAAGA ACTGCTGGCG GACCCGACCG TGTCGGAAAT CATGGTCAAT
TGCCACGACG AAATTTTCGT TGAGCAAGCC GGGCAACTGA AGCGCACGCC CGTGATCTTC
ACCGACGACC GCGCGGTGAT CGGCGCCATC GAACGAATCG TCGCACCGAT CGGCCGCCGC
ATCGACGAAA GTTCGCCAAT GGTCGACGCG CGCCTCGCCG ACGGCTCGCG GGTGAACGCC
GTGATTCCGC CGCTTGCGTT GAAAGGGCCC AGCATTACGA TCCGGAAGTT CTCCAAACGC
AAGCTGGTCG GCCAGGATTT GCTCAACTTC GGCACCATGT CGCCGGAGAT GCTCGAATTC
CTGCACACCG CGGTCGAGCA AGGCGCCAAC ATCATCATCT CCGGTGGCAC GGGCTCGGGC
AAGACCACCT TGCTCAACGT GCTGTCGAGC TACATTCCCG ACAGCGAGCG CATCGTGACC
GTGGAAGACG CGGCCGAACT GCAACTGTCG CAGCCGAACC TCGTCTCGCT CGAAGCGCGC
CCCGCGAACA TGGAAGGCAA GGGCGCGATC CACATTCGCG ATCTGGTGAA GAACTGTTTG
CGGATGCGGC CGGACCGCAT CGTGATCGGC GAGTGCCGGG GCGGCGAAGC GCTGGACATG
TTGCAGGCCA TGAACACGGG GCACGACGGT TCGCTCACCA CCGCTCACGC CAACACGCCG
CGCGACTGCA TCGCGCGTCT GGAAGTGATG ACGTTGATGG CCGGTCTCGA TCTGCCGGTC
CAGGCGATTC GCGAGCAGAT CTGTTCGGCG GTCGACATCA TCGTGCAGCA GTCGCGCTTT
TCCTGCGGCT CGCGCCGCGT CACGCACGTG ACCGAGGTGA GCGGAATGGA GTCGGGCGTC
ATCACGCTGC AAGACGTTTT TGTTTTCAAG GAAGAAGGTT TCGGCGAAAA CGGCAAGATT
GTCGGCAAAT TCGTGCCGAC TGCCTATATT CCCGATTTCT ATCAGGAACT GATTCGCCGC
CGCATTCCCG TGAATACCGA CATCTTCACG CGTGCAGCCG GGTGA
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| Protein sequence | MLNLQIHPRN APVTSLQVEQ GCTIGKDASC DVIVKGMLIG KLQARIVREN NAYYIEDQGG
IAATLVNGSP ITRYGPLTEA DQIEIGVTTI KIVRAAATTQ SAQSAHHAAQ PSQVAAQAPI
SLSAAPSAQA SGPAQFGSSF VSEAQAPSPT AAPYAQAMAP IAESIDRSVA MVRESAVAPS
KPAAEAPLRM HSAQVKKTAA ESLPVAPINS PVGIELRKQA HMKVIAALDL RRLNVARMEE
DDLRKTVSAA LDDILNHDAS FRSPDIALET LKKSVFDEII GLGPLEELLA DPTVSEIMVN
CHDEIFVEQA GQLKRTPVIF TDDRAVIGAI ERIVAPIGRR IDESSPMVDA RLADGSRVNA
VIPPLALKGP SITIRKFSKR KLVGQDLLNF GTMSPEMLEF LHTAVEQGAN IIISGGTGSG
KTTLLNVLSS YIPDSERIVT VEDAAELQLS QPNLVSLEAR PANMEGKGAI HIRDLVKNCL
RMRPDRIVIG ECRGGEALDM LQAMNTGHDG SLTTAHANTP RDCIARLEVM TLMAGLDLPV
QAIREQICSA VDIIVQQSRF SCGSRRVTHV TEVSGMESGV ITLQDVFVFK EEGFGENGKI
VGKFVPTAYI PDFYQELIRR RIPVNTDIFT RAAG
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