Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3522 |
Symbol | prfA |
ID | 6282850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3967244 |
End bp | 3968326 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623101 |
Product | peptide chain release factor 1 |
Protein accession | YP_001897136 |
Protein GI | 187925494 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.217548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.148888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGA GCATGCAACG CAAGCTCGAC CAGCTCACTA CCCGGCTGGC CGAACTGAAC GATCTGTTGA GCCGCGAGGA CATCACCTCG AATCTCGACC AATACCGCAA GCTCACGCGG GAACACGCTG AGCTCGGGCC GGTGGTGGAC CACTACGCGC TATGGCGCCA GGCCATGAAC GACGCAACCA CCGCTCAGGA ATTGCTGGCG GATGCGTCGA TGCGCGACTT CGCCGAAGAC GAAATTCGCG CCGCCCGCGA GCGCATGGAA AAGCTCGGCG CCGAGTTGCA GAAAATGCTG CTGCCGAAAG ACCCGAACGA CGACCGCAAC ATCTTCCTCG AAATCCGCGC TGGAACGGGC GGCGATGAGT CCGCGCTGTT CGCGGGCGAC CTGCTGCGCA TGTACCTGCG CTTTGCCGAG CGCAACCGTT GGCAAGTGGA AATGATGTCG GCGAGCGAGT CGGACCTGGG CGGCTACAAG GAAGTGATCG TGCGGATCGC GGGCGAAGCC GCTTATTCGA AGCTCAAGTT CGAGTCTGGC GGCCACCGCG TGCAACGCGT GCCGGCGACC GAAACCCAAG GGCGCATCCA CACGTCGGCC TGCACGGTCG CGGTCATGCC GGAAGCGGAC GAAATCGGTG AAGTCGAGAT CAATCCGGCG GATTTGCGGA TCGACACGTT CCGCGCGTCC GGCGCGGGCG GGCAACACAT CAACAAGACC GATTCCGCCG TGCGCGTCAC CCACTTGCCG ACGGGGATCG TCGTCGAATG TCAGGACGAC CGGTCGCAGC ACAAGAACAA GGATCGCGCG CTGAAGGTGC TGGCCGCGCG CATCAAAGAC AAGCAATCGC ACGAGCAGCA GGCGAAGGAA GCCGCCACGC GCAAGAGCCT GATCGGCTCG GGCGACCGCT CCGAGCGGAT TCGCACGTAC AACTTCCCGC AAGGGCGTCT GACGGATCAT CGCATCAACC TGACGCTGTA CCGTCTGGAC GCGATCATGG ACGGCGATCT CGACGAACTG ATCGCCGCGC TCGTCAGCGA ACATCAGGCC GAACTGCTGG CCTCGCTGGG CGACGCGGAC TGA
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Protein sequence | MKTSMQRKLD QLTTRLAELN DLLSREDITS NLDQYRKLTR EHAELGPVVD HYALWRQAMN DATTAQELLA DASMRDFAED EIRAARERME KLGAELQKML LPKDPNDDRN IFLEIRAGTG GDESALFAGD LLRMYLRFAE RNRWQVEMMS ASESDLGGYK EVIVRIAGEA AYSKLKFESG GHRVQRVPAT ETQGRIHTSA CTVAVMPEAD EIGEVEINPA DLRIDTFRAS GAGGQHINKT DSAVRVTHLP TGIVVECQDD RSQHKNKDRA LKVLAARIKD KQSHEQQAKE AATRKSLIGS GDRSERIRTY NFPQGRLTDH RINLTLYRLD AIMDGDLDEL IAALVSEHQA ELLASLGDAD
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