| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2913 |
|---|
| Symbol | |
|---|
| ID | 6282286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3293501 |
|---|
| End bp | 3294607 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642622481 |
|---|
| Product | putative glycerol-3-phosphate acyltransferase PlsX |
|---|
| Protein accession | YP_001896531 |
|---|
| Protein GI | 187924889 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.120923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTAA AGCTCACGAT AGATTGCATG GGAGGCGACC ACGGCCCGTC CGTGACCGTT
CCCGCTGCCG TCAACTTCGT TCGATCGCAT CCCGATGCTG AGTTGCTGCT CGTCGGCATC
GAAAGCGCGA TTCGTGCGCA GCTGAAAAAG TTGAAGGCTC AGGACCTGCC GGCGCTGACC
GTCGTACCCG CTTCCGAGAT CGTCGCCATG GACGATCCGG TCGAAGTCGC GCTGCGCAAG
AAAAAAGATT CTTCCATGCG CGTGGCGCTA AACCGCGTCA AGGAAGGCGA GGCGCAAGCC
TGCGTTTCCG CGGGCAACAC CGGCGCGCTG ATGGCGGTCT CGCGCTATGT GCTGAAGACG
CTGTCGGGCA TCGAACGCCC GGCCATCGCG TCGGCACTGC CCAATCCCAA TGGCTACACG
ATGATGCTCG ACCTGGGCGC CAACGTCGAC TGCGAGCCGC AGCATCTGCT GCAGTTCGCG
GAGATGGGGC ATGCGCTCGT GTCCGCGCTC GAGGGCAAGG ATCGGCCTAC CATCGGGCTG
CTCAACATCG GCGAAGAAGT CATCAAGGGC AACGACACCA TCAAACGTGC CGGCGAACTG
CTGCGCGCGA GTACACTTAA CTTTCACGGT AACGTTGAAG GCAACGATAT CTTCAAGGGC
ACGGTCGACG TCATCGTCTG CGACGGTTTT GTCGGCAATG TCGCGCTGAA GACGTCGGAA
GGCCTCGCGC AGATGCTGTC CAACATCATC AAGGAAGAGT TCGGCCGTTC CTGGCTCACC
AAGGTGATGG CGGTGCTGGC TTTGCCGGTA TTGATGCGCT TCAAGAAACG CGTCGATCAT
CGGCAATACA ATGGCGCCGC GTTGCTCGGC CTGCGCGGGC TGGTGATCAA AAGCCACGGT
TCGGCGGATG CTTACGGGTT TGAGTGGGCT ATCAAACGCG GGTATGATGC CGTCAAAAAC
GGCGTGCTGG AACGCCTTGC GCGAGCGATG GAAGAGAACG CGGGTTCTCT TGAACAGGCG
GCGCGCGACG CGAGCGGTGC GGGTCAAGCA AGCCCCATCG CAGGCCAGCC AGCCGAGCCC
TACGCTGCGC AATCCTCGAA GGCATAA
|
|---|
| Protein sequence | MTVKLTIDCM GGDHGPSVTV PAAVNFVRSH PDAELLLVGI ESAIRAQLKK LKAQDLPALT
VVPASEIVAM DDPVEVALRK KKDSSMRVAL NRVKEGEAQA CVSAGNTGAL MAVSRYVLKT
LSGIERPAIA SALPNPNGYT MMLDLGANVD CEPQHLLQFA EMGHALVSAL EGKDRPTIGL
LNIGEEVIKG NDTIKRAGEL LRASTLNFHG NVEGNDIFKG TVDVIVCDGF VGNVALKTSE
GLAQMLSNII KEEFGRSWLT KVMAVLALPV LMRFKKRVDH RQYNGAALLG LRGLVIKSHG
SADAYGFEWA IKRGYDAVKN GVLERLARAM EENAGSLEQA ARDASGAGQA SPIAGQPAEP
YAAQSSKA
|
|---|
| |