| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2022 |
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| Symbol | |
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| ID | 6284642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2285155 |
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| End bp | 2286717 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621587 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001895653 |
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| Protein GI | 187924011 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00497968 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGGAT CGACGCAGCC CGCCACGCTG CCGCCGCTGA CCGGCGGCAA GCTGGTGCTG
GCGACGCTTG CCGTGGCGCT CGCCACGTTT ATGAACGTGC TGGACTCATC GATCGCGAAC
GTGGCGATTC CGACGATCGC CGGCAATCTC GGCGTCTCGG TGGACGAGGG CACGTGGGTG
ATCACGCTGT TCGCCGCCGC CAACGCCATC GCGATTCCGT TGACCGGCTG GCTCGTGCAG
CGCGTCGGGC AGATCAAGCT GTTTGTCTGG GCGATTCTGT TGTTCGTGCT CTCGTCGTGG
CTGTGCGGGA TCGCGCCGAC TCTGCCGGTA CTGCTCGCCG CGCGGATTCT GCAGGGCGCG
GTGGCGGGTC CGTTGATCCC GCTCTCGCAA GCCATTCTGC TCGGCTCGTA TCCGAAGGAG
AAATCCGCGA CCGCGCTCGC CTTGTGGGCG ATGACCGCAA CGGTCGGCCC GATTGCCGGC
CCGGCGCTCG GCGGCTGGAT TACCGACAGC TACTCGTGGT CATGGATCTT CTACATCAAC
ATTCCGGTCG GACTCTTCGC AGCCGGCGTG ACGTGGGCGA TCTACCGCAC CCGCGAAACC
CCGACGAAGC GCTTGCCGAT CGACAAGGTG GGTCTGCTCT CGCTGATCGC ATGGGTCGGC
TCGTTGCAGA TCATGCTCGA CAAAGGCAAG GATCTCGACT GGTTCAACTC GCCGGTGATC
ATCGCCCTGA CTGTGTTCGC GGCGATCAGC TTCGCGTTCT TCGTGATCTG GGAGTTGACG
GAAAAGAATC CGATCGTCGA TTTACGCCTG TTCGGCAAAC GCAATTTTCT CGGCGGCACG
ATCGCGATTT CGGTGGCGTA CGCGGTGTTT TTCTCTAACC TGGTGCTGTT ACCGCAATGG
ATGCAGGAGT ATCTGAACTA CCGTTCCGTC GATGCGGGTC TGGCCACCGC GCCGCTTGGC
ATCTTCGCCG TCATTCTCGC GCCGGTCATG GCCAAGATCA TGCCGAAGTC CGATGCACGG
GTGCTGGCGA CGCTGGCTTT TGTCGGTTTC GCCGGCGTGT TCTTCATGCG CTCGAACTAC
ACCACCGGAG TGGACACGTG GACGCTGGTT TTGCCGACGC TGTTGCAAGG CATCCCGACA
GCGCTCTTCT TCGTGCCGCT GACCGCGATC ATTCTGTCCG GCCTCACGCC CGACCGGATT
CCGGCGGCGG CGGGGCTGTC GAACTTCGCG CGGGTGTTCG CCGGCGCGGT GGGCACGTCG
CTGGCCTCGA CGGGATGGAA CGACCGGACG ATCCTGCATC ATTCGCAACT GGCCGAGCAG
ACGAGCGTGA ACAATCCGAC TTACACGGCC GCGCTGGATG CGCTGCAAAG TACTTTGGGC
GGCAGTCACG CTCAGGCGAT GGCGTTCTTC GAGCGCTCGA TGACTACCCA GGCGGCCATG
CTCGGACTGA ACGATATCTT CTGGCTGTCG GCGGTGATCT TCGTCTTGAT CATCCCGCTG
ATCTGGGTGA CTAAACCGGA CCGCTCCAGT TCGGCCGCGG CGGCGGGAGC GGGTGGTCAT
TGA
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| Protein sequence | MNGSTQPATL PPLTGGKLVL ATLAVALATF MNVLDSSIAN VAIPTIAGNL GVSVDEGTWV
ITLFAAANAI AIPLTGWLVQ RVGQIKLFVW AILLFVLSSW LCGIAPTLPV LLAARILQGA
VAGPLIPLSQ AILLGSYPKE KSATALALWA MTATVGPIAG PALGGWITDS YSWSWIFYIN
IPVGLFAAGV TWAIYRTRET PTKRLPIDKV GLLSLIAWVG SLQIMLDKGK DLDWFNSPVI
IALTVFAAIS FAFFVIWELT EKNPIVDLRL FGKRNFLGGT IAISVAYAVF FSNLVLLPQW
MQEYLNYRSV DAGLATAPLG IFAVILAPVM AKIMPKSDAR VLATLAFVGF AGVFFMRSNY
TTGVDTWTLV LPTLLQGIPT ALFFVPLTAI ILSGLTPDRI PAAAGLSNFA RVFAGAVGTS
LASTGWNDRT ILHHSQLAEQ TSVNNPTYTA ALDALQSTLG GSHAQAMAFF ERSMTTQAAM
LGLNDIFWLS AVIFVLIIPL IWVTKPDRSS SAAAAGAGGH
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