Gene Bphy_5554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5554 
Symbol 
ID6247219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp15377 
End bp16732 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content61% 
IMG OID642597273 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_001861676 
Protein GI186470358 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.477487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.958846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAG ATCAACCTGC CGACACGCTC TCGCGTCCCC TACGCATCGC GCAAAAGGCC 
TTTACTGCGC TCGAGCACTT CCTGCACGTT GAGGCCGCGA GCGGCATCGT GCTGCTGGTC
GCCGCTGCCG GGGCACTCAT ATGGGCGAAC TCCCCGTTCG CACACAGCTA CAACAGCCTG
TGGGAAATGC CCTTGACCTT CGGTGCCGGT GATTTCGTAT TCTCGAGACC TCTGCATTTC
TGGATCAACG ATGCGCTGAT GACGATCTTT TTCCTGGTCG TTGGCATGGA GATCCGGCGG
GAAATCCACG AGGGTTCATT GAGCGATGTC AGGCAAGCCG CGTTGCCCCT CGCAGCAGCC
ATGGGCGGCG TCGCAGCACC CGCGCTCATC TTTCTGGCGA TGAATCACGG GACTGCGGCG
GCAAACGGCT GGGCGGTTCC AACCGCCACT GACATCGCGT TCGCGGTCGG CGTACTGGCG
TTGCTTGGGC GAAACGTGTC GAGCGGTGTT CGCATCTTCT TGCTGACGCT CGCCATTGTC
GACGACATCA TTGCCGTCCT CATCATCGCA GCGTTCTATT CGAGAGGACT GGATTACAGC
GGATTCGCGC TTGCGGCGGC AGGCATTGGC GGCGTGCTTC TGATGCAGAG ACTGGGCATC
GGGACGGCAC CGGCGTATAT CATGCCAGGC GCGATCATAT GGGCTGGGTT GCTGATCAGT
GGAGCCCACC CGACGCTTGC TGGCGTGATT CTCGGTCTGC TCGTACCCGT TACGCCTACA
AGCCGACGCG AGCGTGTACT GGTTGAGCTG TCACGCGCCA CACATGACGT CAACAGCGCC
AGCAATCAGC AAGAAGACAG GCATCGTGCG GAGCGGCTCG CAAAGCCATT GCAGACGCTT
CGTCTTGCGC AACGCGAACT GCTGCCTCCC GTCGTCAGGG TGCAGTGGGC GCTTCATCCA
TGGGTTGCAT ACGGCATTAT GCCGCTCTTC GCGCTAGCCA ATGCCGGAGT AACGCTCGAT
GGCATCGACC TGTCGCAGCA CGACGCGCGC TGGATCGCCG CCGGAGTAAC GCTTGCGCTC
GTGGCGGGAA AACCACTGGG CGTATTTTGC GTCACGTGGG TGCTCGTCAG GCTGAAGCTG
TGCCGGCTAC CTAAGGACGT GTCATGGAGC GGCGTCGGCC TGATCGCGCT TCTCGCAGGC
ATCGGCTTCA CGATGTCGAT CTTTATCGCG ACGCTAGCTT TCGGAGACGA TAACGCGTTG
AATGTAGCCA AGCTGGGGAT TCTGGCCGGC TCGTTCGTCG CGGGTGCGGT TGGTCTGGGC
TGGGGCGTGA TCGGTGCACG CCGCCGCGCG AACTGA
 
Protein sequence
MQRDQPADTL SRPLRIAQKA FTALEHFLHV EAASGIVLLV AAAGALIWAN SPFAHSYNSL 
WEMPLTFGAG DFVFSRPLHF WINDALMTIF FLVVGMEIRR EIHEGSLSDV RQAALPLAAA
MGGVAAPALI FLAMNHGTAA ANGWAVPTAT DIAFAVGVLA LLGRNVSSGV RIFLLTLAIV
DDIIAVLIIA AFYSRGLDYS GFALAAAGIG GVLLMQRLGI GTAPAYIMPG AIIWAGLLIS
GAHPTLAGVI LGLLVPVTPT SRRERVLVEL SRATHDVNSA SNQQEDRHRA ERLAKPLQTL
RLAQRELLPP VVRVQWALHP WVAYGIMPLF ALANAGVTLD GIDLSQHDAR WIAAGVTLAL
VAGKPLGVFC VTWVLVRLKL CRLPKDVSWS GVGLIALLAG IGFTMSIFIA TLAFGDDNAL
NVAKLGILAG SFVAGAVGLG WGVIGARRRA N