| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3963 |
|---|
| Symbol | |
|---|
| ID | 6245493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 937466 |
|---|
| End bp | 938929 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642595725 |
|---|
| Product | heavy metal sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001860132 |
|---|
| Protein GI | 186472790 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.921338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGCC GCTCGATCAC CACCACGCTC GCGCTCGCAT TCGGCGCGAC GACGCTGGTG
GTGTTCGTGC TGGTCGGCAA CTTTCTCTAT CGCGCGCTCG AACAGCAGAT CAGTTCTCAG
GACGACATGA GCATTGTGCT GTCGGCGCGT CATGCGCGTC GTCTTGCGGC GGAGATCGAT
ACGTCAGCTG GCATTCGCGA GCATGGCGAC CGGATCACGA GCATCGTGCT CGGCAATCCG
GGGATGTCCA TGGAAGTGTT CGATCCCAAC GGGCAACTTG CCATCGAACA CAATCTCGAA
AGCACGCTCG GCAGCGCGAC GCCCGCGAAC GACAGCGCAC TGCTCGCCGC CGGCCGCTCC
ATTCAGCGCG TGCAGGCAAC GGATCGCATC ACGCAAGACG CGATCGTCGG ATGGAAAAAC
AGCACCGGCG CGCCGATACG CGGCGTCGCA ACCGACGTCA AGCTGCGTGA CGGCGAAATG
GTCAGCATTC TGATCGCGCG CAACATGAGC GACCGCTACG CGCTACTCGA TCACTACCGC
GACTCGCTCA CGATCTACGG CATCGCCGGC GTGCTACTGA CTACCGTGCT CAGCTATCTG
CTGATTCGCG CGGCCATGCG GCCCGTGCAC GAGATTGCCG CCAGCGCCGC AGAGGTGACC
GTGAACCGGC TCAACACGCG CATTGCCGTC AAGAGCGTGC CGCGCGAACT CGAAACGCTG
GTGACGACGC TGAACGCGAT GCTCGAACGC ATGGATCGCG GCTTCAAGCA GATGTCGCGC
TTTACCGCCG ATCTCGCTCA CGACATGCGT ACGCCGCTCG GCAACATGCG GGGTGCTACG
GAAGTCGCGC TCGCACGTCC GCGCTCTGCC GACGATTACG AAGCGCTGCT CGCGTCGAAT
CTCGAAGAGT GCGAACGTTT GTCGCGCATG ATCGAGAACG TGCTGTTTCT TGCGCGCGCT
GAGCATCCGC AGTTCGTCAA GCACATGCGC ACGTTCGATG CCGTGCAGGA ATTGACGCAC
ATCGGCGAGT ATTTCGAAGG CGTCGCGGAA GATGCCGGCG TGCGCGTGCG CGTTACAGGC
GCCGCGATGC TTACCGCCGA TCTCGAACTC TTTCGCCGCG CGGTCAGCAA TCTGCTGGCG
AATGCACTTC GCTACACGCC ACGCGACAAG GAAATCGCGC TCGACGCGCG CGAGGCCGGC
GACGGCGTGC GCATCACCGT ATCGAATGAA GGCGAGCCGA TCGCGCCCGA ACATCTCGAA
CGCATTTTCG ACCGCTTCTA TCGCGTCGAT CCGTCACGCA GCACGCTGCC CTCGTCCGGT
TCGCCGCAAG GCTCGCCGGG TTCGACGGGG CTTGGCCTTG CGATCGTGCG CACCATCATG
GATCTGCATG GCGGCACCGT CCATGCGGAA AGCGACGCGC GCGGCACGCG TTTCGTGCTG
ACCTTTCGCT CAACGCGCGC ATAA
|
|---|
| Protein sequence | MRGRSITTTL ALAFGATTLV VFVLVGNFLY RALEQQISSQ DDMSIVLSAR HARRLAAEID
TSAGIREHGD RITSIVLGNP GMSMEVFDPN GQLAIEHNLE STLGSATPAN DSALLAAGRS
IQRVQATDRI TQDAIVGWKN STGAPIRGVA TDVKLRDGEM VSILIARNMS DRYALLDHYR
DSLTIYGIAG VLLTTVLSYL LIRAAMRPVH EIAASAAEVT VNRLNTRIAV KSVPRELETL
VTTLNAMLER MDRGFKQMSR FTADLAHDMR TPLGNMRGAT EVALARPRSA DDYEALLASN
LEECERLSRM IENVLFLARA EHPQFVKHMR TFDAVQELTH IGEYFEGVAE DAGVRVRVTG
AAMLTADLEL FRRAVSNLLA NALRYTPRDK EIALDAREAG DGVRITVSNE GEPIAPEHLE
RIFDRFYRVD PSRSTLPSSG SPQGSPGSTG LGLAIVRTIM DLHGGTVHAE SDARGTRFVL
TFRSTRA
|
|---|
| |