| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1613 |
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| Symbol | alaS |
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| ID | 6243104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1831837 |
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| End bp | 1834461 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642593399 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001857841 |
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| Protein GI | 186476371 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.894889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCG CCGAAATCCG CGAGAAATTC CTCAAGTTCT TCGAATCGAA GGGCCATACG
ATCGTCCGTT CGTCGAGCCT CGTGCCCGGC AACGATCCGA CGCTGCTCTT CACCAATTCG
GGCATGGTGC AGTTCAAAGA TGTGTTTCTC GGCGCCGAGT CGCGCCCGTA CTCGCGGGCC
ACGACGGCGC AGCGCAGCGT GCGCGCGGGC GGCAAGCACA ACGACCTGGA AAACGTCGGC
TACACCGCGC GTCACCACAC GTTCTTCGAA ATGCTCGGCA ACTTCTCGTT CGGCGACTAT
TTCAAGCGCG ACGCGATCCA CTACGCGTGG GAACTGTTGA CGGGCGTCTA CCAGCTGCCG
AAGGAAAAGC TCTGGGTCAC CGTCTACCAG GAAGACGACG AAGCCTACGA CATCTGGGCG
AAGGAAGTCG GCGTGCCCGC CGAGCGCATC ATCCGCATCG GCGACAACAA GGGCGCGCGC
TACGCATCGG ACAACTTCTG GCAGATGGCG GACACCGGCC CGTGCGGTCC GTGCTCGGAA
ATCTTCTATG ACCACGGTCC GGACGTGTGG GGCGGCCCGC CTGGATCGCC GGAAGAAGAC
GGCGACCGCT ACATCGAAAT CTGGAACCTC GTGTTCATGC AGTTCAACCG CGACGCGCAG
GGCAACATGA CGCCGCTGCC CAAGCAGTGT GTGGACACGG GCATGGGTCT CGAGCGTATT
GCAGCCGTGC TGCAGCACGT GCACAGCAAC TATGAGATCG ACCTGTTCCA GGCGCTCATC
AAGGCGGCAG CACGAGAAAC GAATATCGAC GATCTGTCGA ACAATTCGCT GAAGGTGGTC
GCCGATCACA TTCGCGCGTG CTCGTTCCTG ATCGTCGACG GCGTGATTCC CGGCAACGAA
GGCCGCGGCT ACGTGCTGCG CCGTATCGTG CGCCGCGCGA TCCGTCACGG CTACAAGCTG
GGCCGCAAGG GTTCGTTCTT CCACAAGCTG GTTGCCGACC TGGTCGCGCA GATGGGCGGC
GCGTATCCCG AACTGAAGGA CGCCGAACAG CGCGTGACGC ACGTTCTGCG TCAGGAAGAA
GAGCGCTTCT TCGAGACCAT CGAGCACGGC ATGTCGATCC TCGAAGGCGC GCTGGCCGAT
CTGGATTCGA AAGGCGGCAA GACGCTCGAC GGCGAAGTCG CGTTCAAGTT GCACGACACC
TACGGCTTCC CGCTCGATCT GACGGCCGAC GTGTGCCGCG AGCGCGGCGT TACGGTCGAC
GAGCCGGCGT TCGATGAAGC TATGGCCCGG CAGCGGGAGC AGGCGCGCGC GGCCGGCAAG
TTCAAGATGG CGCAGGGCCT CGACTACACG GGCGCGAAGA CCACGTTCCA CGGCTATGAA
GAGATCGTGT TCGACGACGC CAGAGTGACG GCGCTGTATG TCGACGGCGC ATCTGTCAAT
GAAGTGACGA AGGGCCAGCA GGCCGTCGTC GTGCTCGATC ACACGCCGTT CTATGCGGAG
TCGGGTGGCC AGGTCGGCGA CCAGGGCGTG CTCGCGAACG CCAGCATCCG CTTTGGCGTC
GTCGACACGC TGAAGGTGCA GGCCGATGTC GTGGGCCATC ACGGCACGCT GGAGCAGGGC
ACGCTGAAGG TCGGCGACGT CGTCAAGGCG GAAATCGACG CCGTCCGCCG CGCGCGCACG
GCGCGTAACC ACTCGGCCAC CCACCTGATG CACAAGGCGC TGCGCGAAGT GCTCGGCGGC
CATGTGCAGC AGAAGGGTTC GCTCGTCGAC GCAGACAAGA CGCGGTTCGA CTTCGCGCAC
AACGCGCCGA TGACGGACGA GCAGATTCGC CGCGTCGAAG AAATCGTCAA CGCGGAAGTG
CTGGCGAACG CGCCCGGCAT CGTGCGCGTG ATGGCGTACG ACGAAGCGGT GAAGGGCGGC
GCGATGGCGC TGTTCGGCGA AAAGTACGGG GACGAGGTGC GCGTGCTCGA TCTGGGCTTC
TCGCGCGAGC TGTGCGGCGG CACACACGTG AACCGCACGG GCGACATCGG CCTCTTCAAG
ATCGTGATGG AAGGTGGCGT CGCGGCGGGT ATCCGTCGCG TGGAGGCCAT CACGGGCGAC
AACGCGGTGC GTTTCGTGCA GGAACTGGAC GCGCGCATCC ATGCTGCCGC GGCTGCACTC
AAGGCGCAGC CGTCCGAACT GACGCAGCGT ATTTCGATGG TTCAGGACCA GGTGAAGGCG
CTCGAAAAAG AACTGGGCGC GCTGAAGTCG AAGCTCGCCT CGAGCCAGGG AGATGAACTG
GCCAGCCAGG CTATCGACGT GTCCGGCGTG CAGGTGCTGG CGGCCACGCT CGAAGGCGCG
GACGTGAAGA CGCTGCGCGA AACGGTCGAC AAGCTCAAGG ACAAGCTCAA GAGCGCGGCC
ATCGTGCTGG CATCCGTCGA AGGCGGCAAG GTCAGCCTGA TCGCGGGCGT CACGGCCGAC
ACGAGCAAGA AGGTCAAGGC GGGCGAACTG GTGAACTTCG TTGCTCAGCA GGTCGGCGGC
AAGGGCGGTG GCCGTCCCGA CATGGCGCAG GCTGGCGGCA CGGAGCCGGC CAATCTGCCG
GCTGCGCTGG CAGGGGTGAA GGGCTGGGTG GAAGCGCAAC TGTAA
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| Protein sequence | MKAAEIREKF LKFFESKGHT IVRSSSLVPG NDPTLLFTNS GMVQFKDVFL GAESRPYSRA
TTAQRSVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKRDAIHYAW ELLTGVYQLP
KEKLWVTVYQ EDDEAYDIWA KEVGVPAERI IRIGDNKGAR YASDNFWQMA DTGPCGPCSE
IFYDHGPDVW GGPPGSPEED GDRYIEIWNL VFMQFNRDAQ GNMTPLPKQC VDTGMGLERI
AAVLQHVHSN YEIDLFQALI KAAARETNID DLSNNSLKVV ADHIRACSFL IVDGVIPGNE
GRGYVLRRIV RRAIRHGYKL GRKGSFFHKL VADLVAQMGG AYPELKDAEQ RVTHVLRQEE
ERFFETIEHG MSILEGALAD LDSKGGKTLD GEVAFKLHDT YGFPLDLTAD VCRERGVTVD
EPAFDEAMAR QREQARAAGK FKMAQGLDYT GAKTTFHGYE EIVFDDARVT ALYVDGASVN
EVTKGQQAVV VLDHTPFYAE SGGQVGDQGV LANASIRFGV VDTLKVQADV VGHHGTLEQG
TLKVGDVVKA EIDAVRRART ARNHSATHLM HKALREVLGG HVQQKGSLVD ADKTRFDFAH
NAPMTDEQIR RVEEIVNAEV LANAPGIVRV MAYDEAVKGG AMALFGEKYG DEVRVLDLGF
SRELCGGTHV NRTGDIGLFK IVMEGGVAAG IRRVEAITGD NAVRFVQELD ARIHAAAAAL
KAQPSELTQR ISMVQDQVKA LEKELGALKS KLASSQGDEL ASQAIDVSGV QVLAATLEGA
DVKTLRETVD KLKDKLKSAA IVLASVEGGK VSLIAGVTAD TSKKVKAGEL VNFVAQQVGG
KGGGRPDMAQ AGGTEPANLP AALAGVKGWV EAQL
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