Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0649 |
Symbol | |
ID | 6242148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 734276 |
End bp | 735766 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642592414 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001856885 |
Protein GI | 186475415 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.814679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCG CCCTGGTCCT CGGTCCCCTG TGCGCGTTCT GCGCACTGAC GCTCAGCGGC TGCCTGCTCG GCCCCGACTA CTCGCGCCCG CAGGTGGAGG TGCCCGCGAC GTACCGCTTT CCCGAGAACT ACGCATCGGA TGTCGCCAAC ACCGAATGGT GGAAGCAGTT CGACGACCCG GTGCTCAACG ACCTGATCAC CGCGGCGCTG GCGAACAACA ACGATGTGAA GATCGCCGCC GCACGCGTCG ACCAGTTCCT CGGCCAGTTC GTCACCACGC GCGCGGCGCT GTTCCCGCAG GTCAGCGCGG GGCTGGATGC GGCGCGCGAG CGCGTCTCGA CCTCGTCGCC GCTGTTCACG GGCGTGCAGA ACCCGGTGTT CAACTCGTAT CAGCTGGCGC TGTCGGCGTC GTGGGAGATC GATCTGTTCG GCCACAACCG GCGCCTGACG GAAGCGGCGC GCGCAAGCCT GCTGTCGACG GAAGAAGCGC GGCGCGGCAC GATCCTCACG CTGGTGTCGT CGGTGGCATC GTCGTACATC AACCTGCGCA GCCTCGACCG GCAGCTGGAG ATCGCGAAGG CGACCACGGC GAGCCGCGCC GAATCCGTGC ACGTGTTCGA GCTGCGCTTC CAGGGCGGCG AGGTCTCGCA GATGGAACTC GCGCAGAGCC AGTCCGAATA CGAGGACTCG CGCGCGCGCA TCCCGCAGAT CGAGTCGCAG ATCGCGCAGC AGGAAGATGC GCTGTCGGTG CTGCTCGGGC GCAATCCGGG CGATATCCTG CGCGGCCGCG CGCTGGGCGA ACTGGCGGCA CCCGCGGTGC CCGCCGGACT GCCGTCGAAC CTGCTCGAAC GCCGGCCCGA TCTGCGTCAG GCCGAGCAGG ATCTGGTCGC GGCCAATGCG CAGATCGGCG CGGCGAAAGC ACTGTATTTC CCGCAGATCT CGATCACGGG GCTGCTCGGC ACGCAGAGCG GCCAGTTCTC GAGGCTCTTT ACGGGGCCGG CGCGCGTGTG GTCGTTTGCC GGCTCCGTGA CGCAGCCGAT CTTCGAGGGC GGCGCGATCG CCGGCCAGGT GAAGCAGGCC GAGGCCGTGC AGCAGCAGGC GCTGTACACG TACCGCAAGG CGATCCAGGT GGCGTTCCAG GAGGTCGACG ATGCGCTGAT CTCGTCGCAG AAGCTGCGCG AGCAGTTCGA GGTGCAGGGG CGGCAGGTGC AGGCGCTCGC GACGTATGCG CATCTGGCGA GGCTGCGGTA CGAAGGCGGC TATACGAGCT ATATCGAAGT GCTCGATGCC GAACGCAGCC TGTTCAATGC GCAGCTGAGC GAGACGCAGA CGCAGGCGGG CGTGCTGGTG TCGTACGTGA GCCTGTACAA GGCGATGGGC GGCGGCTGGG TGGTCACGGC TGAGGGCATG ACTACCCAGC AGGCCGCGCA CGCGGGCGAC GCGGCACAGC CGGTCAACGG CACGAACGGC ACGGTGGAGG AAGTGAAATG A
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Protein sequence | MRRALVLGPL CAFCALTLSG CLLGPDYSRP QVEVPATYRF PENYASDVAN TEWWKQFDDP VLNDLITAAL ANNNDVKIAA ARVDQFLGQF VTTRAALFPQ VSAGLDAARE RVSTSSPLFT GVQNPVFNSY QLALSASWEI DLFGHNRRLT EAARASLLST EEARRGTILT LVSSVASSYI NLRSLDRQLE IAKATTASRA ESVHVFELRF QGGEVSQMEL AQSQSEYEDS RARIPQIESQ IAQQEDALSV LLGRNPGDIL RGRALGELAA PAVPAGLPSN LLERRPDLRQ AEQDLVAANA QIGAAKALYF PQISITGLLG TQSGQFSRLF TGPARVWSFA GSVTQPIFEG GAIAGQVKQA EAVQQQALYT YRKAIQVAFQ EVDDALISSQ KLREQFEVQG RQVQALATYA HLARLRYEGG YTSYIEVLDA ERSLFNAQLS ETQTQAGVLV SYVSLYKAMG GGWVVTAEGM TTQQAAHAGD AAQPVNGTNG TVEEVK
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