| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3808 |
|---|
| Symbol | |
|---|
| ID | 6198011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010580 |
|---|
| Strand | - |
|---|
| Start bp | 119454 |
|---|
| End bp | 120419 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641703941 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001831093 |
|---|
| Protein GI | 182676946 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.323672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC GCGCCGTAAA GTGCCCCGAG CTTGAATATA TCATTTGTGA TTCCGATCAG
TCATTCCGCT GGCACGCCCA TAGCTTTCCG CACGCGCTAG CGCGCTGGAA CTACCATCCG
GAATTCGAGA TCCATCTCAT CACGCGCTCG TGCGGCACAG TTTTTATTGG GGACTACATC
GGCGATTTCG CTCCTGGCCA TCTTTGCCTC GTGGGCGCCA ACCTGCCGCA TGTATGGGTA
AGCAATATCG CGCCTGGCGA GTTCATCGAA AGGCGAGACA TCGTCCTGCA ATTCGACGAG
AGCCTGCTGG TTCACGCAGC CGCCATGTTC CCGGAATTTA TCGAGATTCG CTCATTTCTG
AACCTCGGTC TGCGCGGCCT CGAATTCCAC GGGGCGACGG CGAAGCGAGG TGCTGCAATT
CTGCAGAAGA TCGGTGAAGC CCACGGTTTC CACCGCCTGA CACTCTTCTT CGAGCTCATC
GATATGCTTG CCCGTTCGAA TGAAAAGACC GTTTTGGCCG GCGTGGATTA CGCGCCAAGC
CTCGATCCGC GTACCGCCAA AATTATGGAA GACATTACTT CCTATGTTCT CAGCAATCTC
TCTCGTGAGG TGCGCATGGT GGCCGCTGCC AAGATCGCCG GTATGACGGC CTCTGGCTTT
TCACGGTTTT TCAAGAAGAA CACGGGTCGG ACCTTCGTTG AATATGTACA CAAGCTGCGC
ATTGGCCGTG CGTGCAGAAT TTTGATTGAG ACCAATGTCC CAATCACGTC CATCTGTTTT
GACGTTGGCT ACAACAATGT GTCCAATTTT AATCGTCATT TCCGCAAGGA GCGTGGTGTG
ACGCCCTCCG CTTACAAGCG AATGGCGGGG CAGCAACTGC TGAGCGACCC CCGGGGTCTG
TCCAGACAGG GATCCTTCGG AGGCCGCGCC CGATATCAGG AGAGCGAAGA TGTTTCTCGG
CATTGA
|
|---|
| Protein sequence | MSDRAVKCPE LEYIICDSDQ SFRWHAHSFP HALARWNYHP EFEIHLITRS CGTVFIGDYI
GDFAPGHLCL VGANLPHVWV SNIAPGEFIE RRDIVLQFDE SLLVHAAAMF PEFIEIRSFL
NLGLRGLEFH GATAKRGAAI LQKIGEAHGF HRLTLFFELI DMLARSNEKT VLAGVDYAPS
LDPRTAKIME DITSYVLSNL SREVRMVAAA KIAGMTASGF SRFFKKNTGR TFVEYVHKLR
IGRACRILIE TNVPITSICF DVGYNNVSNF NRHFRKERGV TPSAYKRMAG QQLLSDPRGL
SRQGSFGGRA RYQESEDVSR H
|
|---|
| |