Gene Bfae_28040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_28040 
Symbol 
ID8401348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3149633 
End bp3150685 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content63% 
IMG OID644998840 
ProductABC-type spermidine/putrescine transport system, ATPase component 
Protein accessionYP_003156160 
Protein GI257069905 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.539146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACTT TCGATGACAT TACCGTCCGA TTCGGCCAGT TCACCGCATT GCCCAGTCTA 
TCGCTGAACA TCGACGAAGG TGAATTCTTC ACCCTTCTGG GGCCGTCGGG ATGTGGAAAA
TCTACCGCTT TGAGAACGTT GGCAGGGTTT ACTGAGCCTG CATCCGGGAG GGTCCTCGTC
GACGGGAGGG ACGTGACGGC CCTCCCCAGC GATCAGCGCG GGGTCGGGAT GGTCTTCCAG
AACTACGCAC TGTTCCCGAG CATGTCCGTC CGCGAGAACA TCGCCTTCGG TCTCAAGGTG
GCCAAACGGC CGAAGGACGA GATCCACGAG CGCGTCCGCG AGATCGCCTC CGAGGTCGCC
TTGGCGCCTG CACAGTTGGA CAAGGGCGTT GCCGAGCTTT CCGGCGGCCA GCAGCAGCGC
GTGGCCATCG CCCGAGCGCT CGTGATGCGC CCGCGGATCC TGCTCCTCGA CGAGCCCCTG
TCGAACCTTG ACGCACAACT TCGCGGCCAG CTGCGAATCC AGCTCAAAGA ACTGCAGCAG
CAGTTCGGAA TCACCAGCAT CTACGTCACC CATGACCAGG ACGAGGCGAT GTCGATGAGT
GATCGCATCG CGGTCCTCAA CCAGGGTCGC GTCGAACAGG TGGGTACACC ACGCGAGATC
TACGAGAGTT CGGCCTCCGA GTTCGTCTGC ACCTTCATCG GGTCCGTGAA TCGTCTCAGC
GACAGCTCTG TCACGTCGCT CGCAGCACAC CGCGACTCAC CGGTGCGCCC TGGACTCTCC
AGCTACGCGA GGGTCGAGCG GTTCGTCCTC CGGAGCAAGG GCCAGGCCGC AAAGACGGAG
GGTCTTCACT TCCAGGACGG CTCTGTCGAG CGCGCCGATT ACCACGGCTA CTTCAGCCAG
TACGCCGTGC GCGTCGGAGA CAAGCCATTG ACGGTCCGTA TTCCCTATCA CCCCGATGCG
CCGTCCTTCG CTGTCGGAGA CGAGGTCGCC GTCGGCATCG CCGCAGACGA TGTGCTGCAG
TATGCCCCCG AGGAGGGCGT GATCGCCGTA TGA
 
Protein sequence
MITFDDITVR FGQFTALPSL SLNIDEGEFF TLLGPSGCGK STALRTLAGF TEPASGRVLV 
DGRDVTALPS DQRGVGMVFQ NYALFPSMSV RENIAFGLKV AKRPKDEIHE RVREIASEVA
LAPAQLDKGV AELSGGQQQR VAIARALVMR PRILLLDEPL SNLDAQLRGQ LRIQLKELQQ
QFGITSIYVT HDQDEAMSMS DRIAVLNQGR VEQVGTPREI YESSASEFVC TFIGSVNRLS
DSSVTSLAAH RDSPVRPGLS SYARVERFVL RSKGQAAKTE GLHFQDGSVE RADYHGYFSQ
YAVRVGDKPL TVRIPYHPDA PSFAVGDEVA VGIAADDVLQ YAPEEGVIAV