Gene Bcep18194_B1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1194 
Symbol 
ID3752959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp1344565 
End bp1347708 
Gene Length3144 bp 
Protein Length1047 aa 
Translation table11 
GC content63% 
IMG OID637766043 
Producthydrophobe/amphiphile efflux pump protein 
Protein accessionYP_371952 
Protein GI78062044 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 



Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000151988 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.324447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGT TCTTTATCAG GCGGCCCATC TTTGCGTGGG TGATCGCCAT CGTCATCATG 
CTGGCCGGTT ATCTGGCGAT TCGGTCGTTA CCGATCAACC AGTATCCGAA CATCGCGGCG
CCCGCGGTGT CGATCACGGT CAGCTACCCG GGCGCGTCCG CGCAGACGGT TCAGGACACG
GTCGTCCAGC CGATCGAGCA GCAGCTCAAC GGTCTCGACG GCCTGCGTTA CATGTCGTCG
GAAAGTAACG CCGACGGCAG CATGACGATC GTCGCGACGT TCGACCAGGG CACCAACCCC
GATATCGCGC AGGTCCAGGT GCAGAACAAG CTGTCGCTCG CGACGCCGCT TCTGCCCCAG
GAAGTGCAGC AGCAGGGGAT TCGCGTCGTC AAGTACCAGA TCAACTTCAT GATGGTCGCG
GCGCTCGTTT CCGAAGACGG AAAAATGTCG AGCGGCGACC TCGGCAACTA TCTGGCGTCG
AACCTCCAGG ATCCGATCCT GCGAACGAAA GGGGTGGGCG ACTACCTGCT GATGGGTTCG
CAGTACGGGA TGCGGATCTG GCTCGATCCG GCGAAGCTCG ACAGCTATTC GCTCACGCCG
CTCGATGTCA CGAACGCGAT CCGGTCGCAG AACGTCCAGG TATCGTCGGG CCAGCTTGGC
GGCCTGCCGA CGCGGCGTGG CGTGGAACTG AGCGCGACCG TGATCGGGAA GGTGCGCCTG
CGTACCGCCG ACGAGTTCAA GCAGATCCTG CTCAAGGTGA ATGCCGACGG TTCGCAGGTC
AAGCTCGGCG ACGTCGCGAC CGTGAGCCTC GGGCCGGAGA ACTACTCGAT CTCGAGTATG
TACAACGGCA AGCCGTCGGC CGGTATTGCA CTGCGCCTGG CGACCGGCGC GAACCTGCTC
GAGACGGTGG AATCCGTCAA GAAACTGCTC AAGGAACAGG AACCGCTGTT GCCGCCGGGC
GTGAAGATCG TCGTTCCGTA CGATACGTCG CCGGTCGTTC ATGCGTCGAT CCACGAAGTG
GTCAAGACGC TGATCGAAGG CATCATCCTC GTGTTCCTGG TGATGTACCT GTTCCTGCAG
AACATCCGCG CGACGCTGAT TCCGACGTTG GCGGTGCCGG TCGTGCTGCT GGGTACGTTC
GGCGTGCTCG CCGCGTGCGG CTTCACGATC AACACGCTCA CCATGTTCGG CATGGTGCTG
GCGATCGGCC TGCTGGTCGA CGACGCGATC GTCGTGGTGG AGAACGTCGA GCGCGTGATG
ACCGAGGAAG GGCTGAGCGC GCGGGAAGCG ACCAGCAAGT CGATGGGGCA GATCCAGGGC
GCGCTGGTCG GTATCGCGAT GGTGCTGTCG GCCGTGTTCC TGCCGATGGC GTTCTTCGGC
GGATCGACGG GCGTGATTTA TCGCCAGTTC TCGATCACGA TCGTGTCGGC GATGGCGCTG
TCGGTGCTGG TTGCTCTGGT GTTCACGCCG GCGTTGTGCG CGACGATGCT CAAGCCGGGC
GACGCCGATC ATCACGTGAA GAAGGGCTTC TTTGGGTGGT TCAACCGCAC CTTCGACCGC
GGTACCGACC GTTACGAAGG TGCAGTCGCG GCGATCCTGC GCAAGAAGGG GCGCTACATC
GTCATCTACC TGCTGATCGT GGTCGGCATG GGCTTCCTGT TCACGCGCAT CCCGACGGCC
TTCCTGCCGG ACGAAGACCA GGGGACGCTG TTCGTTCAGC TCCAGATGCC GGGCAATGCA
TCGGCGGAAC GGACCGAAGA TGCGTTGGCG AAGGTGCGTG ACTACCTGTT GAAGGACGAG
GCGGATATCG TCGAATCGGT CTACACGGTG AACGGCTTCA ACTTCGCGGG GCGCGGGCAG
AACTCCGCAC TGGCATTCGT CGGGCTCAAG CCGTGGGCCG CGCGCAAGGG GAGCGACACC
ACTGTGTTCG GCCTTGCACA GCGTGCGGGT GCGGCGTTTT CGAAGATCAA GGACGGCATC
GTGATTCCGA TCGTGCCGCC CGCGATCATG GAAATGGGCA ACTCGCAGGG CTTCGACGTG
TACCTCCAGG ATCGGACCGG TCAAGGCCAC GACGCGCTGA TGGCGGCACG CGACCAGTTC
CTGAAGCTCG CGCATGCCAA CCCGCTGCTG GCCAACGTTC GCCCGAACGG CATGAACGAC
GAGCCGCAGT TCCACATCGA TATCGACGAT GAGAAGGCGC GTGCGCTGCA GGTCAGCATC
GCCGACATCA ACGATACGAT GACCGCTGCC TGGGGTTCCC AGTACGTGAA CGACTTCGTC
GATCGCGGCC GTGTGAAGAA GGTGTACGTC CAGGGCCTGC CGGATGCGCG CGTGGGTCCG
GAGGATCTCT ACAAATGGTA TCTGCGCAAC AGCAACGGCC AGATGGTGCC GTTCTCGGCG
GTGGCGTCGG GGCATTGGGA ATACGGTTCG CCGAAGCTCG AGCGCTACAA CGGCATTCCG
GCCGTCGAAC TGCAGGGCCA GCCGACAGCC GGCCACAGCT CGGGCGAAGC GATGCAGGAG
ATCGAGAAGA TCGCGGCGCA GCTGCCGAAC GGATTCGGGC TGGCGGTCAC GGGGCTGTCC
TATGAGGAAC AGCTGTCGGG CTCGCAGGCG CCGGCGCTCT ATGCACTGTC GATCCTGATC
GTGTTCCTCT GTCTTGCCGC GCTGTACGAG AGCTGGTCGG TGCCGTTCTC GGTGCTGATG
GTCGTGCCGC TCGGCGTGAT CGGCGCGGTG GTCGCCACGC TGGCGCGCGG CCTGACGAAC
GACGTGTTCT TCCAGGTGGG CCTGCTGACG ACGGTCGGCC TGTCCGCGAA GAACGCGATC
CTGATCGTCG AGTTCGCGAA AGAGCTGTAC GAAAAAGAAG GGATGTCGCT GATGCAGGCG
GCCGTTCAGG CGGCACGGCT GCGGCTGCGC CCGATCATCA TGACGTCGAT GGCGTTCGTG
CTCGGCGTGC TGCCGCTCGC GATCTCGAAC GGCGCCGGCT CGGGCAGCCA GCACTCCGTC
GGCACCGGTG TGGTCGGCGG GATGATGACC GCGACGTTTC CTGGCCGTGT TCTACGTGCC
GCTGTTCTAT GTGCTGGTGA CGGGCCTGTT CTCGCGCGGC AAGAAAGGCA AGGCCGACAA
GGCCGACGAC ATCGACAAGG TTGA
 
Protein sequence
MSQFFIRRPI FAWVIAIVIM LAGYLAIRSL PINQYPNIAA PAVSITVSYP GASAQTVQDT 
VVQPIEQQLN GLDGLRYMSS ESNADGSMTI VATFDQGTNP DIAQVQVQNK LSLATPLLPQ
EVQQQGIRVV KYQINFMMVA ALVSEDGKMS SGDLGNYLAS NLQDPILRTK GVGDYLLMGS
QYGMRIWLDP AKLDSYSLTP LDVTNAIRSQ NVQVSSGQLG GLPTRRGVEL SATVIGKVRL
RTADEFKQIL LKVNADGSQV KLGDVATVSL GPENYSISSM YNGKPSAGIA LRLATGANLL
ETVESVKKLL KEQEPLLPPG VKIVVPYDTS PVVHASIHEV VKTLIEGIIL VFLVMYLFLQ
NIRATLIPTL AVPVVLLGTF GVLAACGFTI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
TEEGLSAREA TSKSMGQIQG ALVGIAMVLS AVFLPMAFFG GSTGVIYRQF SITIVSAMAL
SVLVALVFTP ALCATMLKPG DADHHVKKGF FGWFNRTFDR GTDRYEGAVA AILRKKGRYI
VIYLLIVVGM GFLFTRIPTA FLPDEDQGTL FVQLQMPGNA SAERTEDALA KVRDYLLKDE
ADIVESVYTV NGFNFAGRGQ NSALAFVGLK PWAARKGSDT TVFGLAQRAG AAFSKIKDGI
VIPIVPPAIM EMGNSQGFDV YLQDRTGQGH DALMAARDQF LKLAHANPLL ANVRPNGMND
EPQFHIDIDD EKARALQVSI ADINDTMTAA WGSQYVNDFV DRGRVKKVYV QGLPDARVGP
EDLYKWYLRN SNGQMVPFSA VASGHWEYGS PKLERYNGIP AVELQGQPTA GHSSGEAMQE
IEKIAAQLPN GFGLAVTGLS YEEQLSGSQA PALYALSILI VFLCLAALYE SWSVPFSVLM
VVPLGVIGAV VATLARGLTN DVFFQVGLLT TVGLSAKNAI LIVEFAKELY EKEGMSLMQA
AVQAARLRLR PIIMTSMAFV LGVLPLAISN GAGSGSQHSV GTGVVGGMMT ATFPGRVLRA
AVLCAGDGPV LARQERQGRQ GRRHRQG