Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B1064 |
Symbol | |
ID | 3752829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 1189574 |
End bp | 1190254 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637765913 |
Product | Type II secretory pathway component PulJ |
Protein accession | YP_371822 |
Protein GI | 78061914 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00786562 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCG CCGCTGACCC GCGCGCGGCA GCGCGTGCCG GCAACCGTGC CCGTGCCCGC GGCTTCACGC TGATCGAGAT GCTGGTCGCG ATTGCGCTGC TCGCCGTGAT CGCGCTGTTG TCGTGGCGCG GTCTCGATGC GACGATCCGC GGCCGCGACG ATATTGCGTC GAATCTGGCG CAAACGCGTC TGCTCGGCCG CTACTTCTCT CAACTGCAGT TCGACCTGAC GAACCTCGTG ACGCCCGATG AAGTATTCGG GCCGCCGCTG CGCATCCGCC CGGGCGAACT CGTGATGGTG CGCCATCTCG GGGTCGGCGG CGGGCCGACG CAGATGCAGG TGGTGCGCTA CCAGCTCAAG GGGCGCGAGC TCGTGCGCAG TGCGTCGCAG CCGCTCGCGT CGCTCGTCGA AGTCGACGAC GCGCTGCATC ACATGGATGG GTTCGCGCGC GTGGTGGTCA GCAATGATGC GCGCTCGATG CAGCTTTCCG TGTGGATTCC GCCCGGCGGA TGGACGACGA GCCAGGCCGT CATCGAACAG TCGTATGCGC AGTTTCTCGC GCAGCACGGC ATCAGCAACT TCACGTCGAT CGGCGTGCCG GTGCCGCGCG GCGTTCGCTT CTCGGTCACG ATGGGCGCGC CGGCGGTCGA ATACGTGCGG ACGATCCCGA TCGGCCAGTG A
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Protein sequence | MKRAADPRAA ARAGNRARAR GFTLIEMLVA IALLAVIALL SWRGLDATIR GRDDIASNLA QTRLLGRYFS QLQFDLTNLV TPDEVFGPPL RIRPGELVMV RHLGVGGGPT QMQVVRYQLK GRELVRSASQ PLASLVEVDD ALHHMDGFAR VVVSNDARSM QLSVWIPPGG WTTSQAVIEQ SYAQFLAQHG ISNFTSIGVP VPRGVRFSVT MGAPAVEYVR TIPIGQ
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