| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5809 |
|---|
| Symbol | |
|---|
| ID | 6128613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2988486 |
|---|
| End bp | 2989919 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641652893 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001779420 |
|---|
| Protein GI | 170738160 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.231946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCT ACGAAACCCT CGCCCATACA ATCGCCGACG ACATCCGCAA CGGCAACCTC
GCCGTCGGCA CACGTCTGCC GTCGCTGCGG CAGATCATCG CGCAACATGG CGTGAGCCAG
TCGACGGTGT TTCGCGCGTA TTACCTGCTC GAACAGTGGG GGCTGATCCG CGCGCGCGAA
CGCTCGGGCT ACTACGTCGC GCCGGGCGCG CAGCCGGCCA CGAGCCCGGC GACGAAACGC
CGGACGAGCC GCGCGGGTGC GACGCGCAAG GTCGACATCA GCAACCTCGT GTTCTCCGTG
CTCGATGCGG CCACGCAGCC CGGCATCGTG CCGCTCGGTT CCGCGTTCCC GGCGCCGCAG
CTGTTTCCGC TGCCGCGCCT GGCGAAGTCG CTCGCGCAGG CCACGCGACT CGTGAGCCCG
TGGAGCACGG TGGTCGACCT GCCGCCCGGC AACGAAGCGC TGCGTCAGCA GATCGCGCGG
CGCTATCTCG CCACCGGCAT CTCGCAGCCG ATCGACGAAA TCGTCGTCAC GAACGGCGCA
CTCGAAGCGC TGAACCTGTG CCTGATGGCG GTGACGCGGC CCGGCGACGT CGTCGCCGTC
GAAGCGCCCG GCTTCTATGC GGCACTGCAG GCGATCGAGC GGCTCGACCT GCGCGCGGTC
GAGATTCCCG TCGATCCGCG CACCGGCCTC GATCTCGATG CGCTCGCGAG CGCGCTCGAC
CGGCACGCCA TCCGCGCGTG CTGGTTCATG ACCAATTTCC AGAATCCGAC CGGCGTCACG
CTGACCGCCG AAAAGAAGCG CGCGCTCGTC GAATTGCTCG CGGCGCGCAA CGTGCCGCTG
ATCGAGGACG ACGTCTACGG CGAACTGCAT TTCGGCCCGG ACTATCCGCT GCCCGCGCGC
GCGTTCGACC GTCACGGCCT CGTGATGCAC TGCAGCTCGT TCTCGAAGAC GCTCGCGCCC
GGCTACCGGA TCGGCTGGGC CGCCGCCGGC CGGTTCGCGG AGAAGGTGCA GCGGCTCAAG
CTGATGACGA CGCTGTCGGC CAGCATTCCC GCGCAGGCCG GCATCGCGAA CTATCTCGAG
CACGGCGGCT ACGACCGGCA CCTGCGCAAG CTGCGCGGCG CGCTGCACGC GCAGCTCGAC
CGGATGGACG ACGCGCTGCG GCGCTGGCTG CCGGCCGGCG TCGAATGGGT GCGGCCCGAC
GGCGGGTATT TCCTGTGGCT CGCGTTTCCC GATGCGATCG ACGCGATGGA ACTGCATCGC
CAGGCGATCG AACGCGGCAT CAGCTTCGCG CCGGGGCCGC TGTTTTCGGC CGCGCACGGC
TTCGAGCGCT GCGTGCGCGT GAACTTCGGC CATCCGTGGA GCCGCGACAT CGAGCGCGCG
ATCCGCGTAC TCGGCGAACT GGTCGCGCAG CCGTCGGTCC GCAAGGCAGG TTGA
|
|---|
| Protein sequence | MKRYETLAHT IADDIRNGNL AVGTRLPSLR QIIAQHGVSQ STVFRAYYLL EQWGLIRARE
RSGYYVAPGA QPATSPATKR RTSRAGATRK VDISNLVFSV LDAATQPGIV PLGSAFPAPQ
LFPLPRLAKS LAQATRLVSP WSTVVDLPPG NEALRQQIAR RYLATGISQP IDEIVVTNGA
LEALNLCLMA VTRPGDVVAV EAPGFYAALQ AIERLDLRAV EIPVDPRTGL DLDALASALD
RHAIRACWFM TNFQNPTGVT LTAEKKRALV ELLAARNVPL IEDDVYGELH FGPDYPLPAR
AFDRHGLVMH CSSFSKTLAP GYRIGWAAAG RFAEKVQRLK LMTTLSASIP AQAGIANYLE
HGGYDRHLRK LRGALHAQLD RMDDALRRWL PAGVEWVRPD GGYFLWLAFP DAIDAMELHR
QAIERGISFA PGPLFSAAHG FERCVRVNFG HPWSRDIERA IRVLGELVAQ PSVRKAG
|
|---|
| |