| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3949 |
|---|
| Symbol | |
|---|
| ID | 6126782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 878201 |
|---|
| End bp | 879115 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641651057 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001777590 |
|---|
| Protein GI | 170736330 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.470463 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCC ATCATGAAGT GATCGTGATC GGCGGCAGCT TCGCGGGGCT GTCGGCCGCG
ATGCAACTGG CGCGGGCACG CCGCCGCGTG CTCGTGATCG ACGCCGGGCG GCCGCGCAAC
CGTTTTGCCG AACACGCGCA CGGCTTCTTC GGGCAGGACG GCAAGCCGCC CGCGCGGATT
GTCGCCGAAG CGAGCGCGCA ACTCGCCGCG TATCCGACCG TGCAGCGCAT CGACGGCGAG
GCGCGCACGG CCGAGCGCGA CGCGAACGGA CGCTTTCACG TGACGCTGGC CGACGGCAGC
CACGCGAGCG CCGACCGGCT GATTCTGGCG ACCGGCATCC GCGACGAACT GCCGGCGCTG
CCGGGTCTCG CCGAACGTTG GGGCATCAGC GTGCTGCACT GCCCGTACTG CCACGGATAT
GAAGTGAGCG GCCAGCGGCT CGGCGTGCTC GCCACGCATC CGCTGTCGGT CCATCAGGCG
ATCCTGATTC CGGACTGGGG ACCGACGACG TGGTTCACGC AGGGCGTGGT CGAAGCGAAC
GAAGAGGAAG CCGCGTTGCT CGCAGCACGC GGCGTACGCA TCGAGCGCTC GCCGGTCGTC
GAGATCCTCG GCGATGCGCC GCGTATCGAC GCGCTGCGGC TCGCCGACGG TCAGCTCGTG
TCGATCGATG CGTTGTTCAT CGGCGCGCGC ACCGACATGG CGAGCGACCT CGCGCAGCAG
CTCGGCTGCG CGTTCGACGA AGGGCCGCTC GGCACCGCGA TTCGCGTCGA TACGTGGAAG
CAGACGAGCG TCGCCGGCGT GTACGCGGCC GGCGACGCGT CGAGCCTGAT GACCAACGCG
ACGTTCGCCT CGGCATCGGG CGTGGCGGCG GGGGTGGGCG TACATCGGTC GCTGATTTTC
GGGCTGAACG CGTAG
|
|---|
| Protein sequence | MDTHHEVIVI GGSFAGLSAA MQLARARRRV LVIDAGRPRN RFAEHAHGFF GQDGKPPARI
VAEASAQLAA YPTVQRIDGE ARTAERDANG RFHVTLADGS HASADRLILA TGIRDELPAL
PGLAERWGIS VLHCPYCHGY EVSGQRLGVL ATHPLSVHQA ILIPDWGPTT WFTQGVVEAN
EEEAALLAAR GVRIERSPVV EILGDAPRID ALRLADGQLV SIDALFIGAR TDMASDLAQQ
LGCAFDEGPL GTAIRVDTWK QTSVAGVYAA GDASSLMTNA TFASASGVAA GVGVHRSLIF
GLNA
|
|---|
| |