Gene Bcenmc03_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2060 
Symbol 
ID6123724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2291132 
End bp2291941 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content70% 
IMG OID641638632 
Productphosphomethylpyrimidine kinase 
Protein accessionYP_001765343 
Protein GI170733396 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 
TIGRFAM ID[TIGR00097] phosphomethylpyrimidine kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.373143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC CGATACCCAA CCTCCTGACG ATCGCCGGCT CCGATTCGGG CGGCGGCGCA 
GGCATTCAGG CCGACCTGAA GACGTTTTCC GCACTCGGTG CGTATGGCGC GAGCGTGATC
ACCGCGCTGA CCGCGCAGAA CACGCGCGGC GTGACGGGCG TGCATGCGCC GGACGCCGCG
TTCGTGACCG CGCAGCTCGA CGCGGTGTTC GACGATATCC GCATCGACGC GGTCAAGATC
GGGATGCTCG CCAACGCGGC GATCGTGCAG GCGGTGGCCG ACGCGCTGCG CCGTTACGCG
CCGCGCTTCG TGGTGCTCGA TACGGTGATG ATCTCGAAGA GTTCGCACGC GCTGCTCGCG
CCCGATGCCG TCGACGCGCT GCGCGACACG CTGCTGCCGC TCGCGACGGT CGTCACGCCG
AACCTGCCGG AAGCGGCCGC GCTGCTGAAC GACGCGCCCG CCACCACCGA AGACGACATG
GTGCGGCAAG GCCAGGCGCT GCTGCAGACG GGCGCACGCG CGGTGCTGAT GAAGGGCGGC
CACCTGCCCG ACGCGTCCGC GAGCCCCGAC TGGCTCGTCG AGGCAACCCG CACCGTGCGG
CTCGACGGCG CACGCGTGCC GGTCAGCAAC ACGCACGGCA CCGGCTGCAC GCTGTCGTCG
GCAATCGCCG CGCTGCTGCC GCAGCAGTCC GACCTCGAAA GCGCGGTACG CGAGGCAAAA
ACCTACCTGA CCGGCGCGAT CGCCGCGAGC GGCCACCTCG ACGTCGGTCA CGGCGTCGGT
CCGGTCCATC ACTTCCATCG CTGGTGGTGA
 
Protein sequence
MTHPIPNLLT IAGSDSGGGA GIQADLKTFS ALGAYGASVI TALTAQNTRG VTGVHAPDAA 
FVTAQLDAVF DDIRIDAVKI GMLANAAIVQ AVADALRRYA PRFVVLDTVM ISKSSHALLA
PDAVDALRDT LLPLATVVTP NLPEAAALLN DAPATTEDDM VRQGQALLQT GARAVLMKGG
HLPDASASPD WLVEATRTVR LDGARVPVSN THGTGCTLSS AIAALLPQQS DLESAVREAK
TYLTGAIAAS GHLDVGHGVG PVHHFHRWW