Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0875 |
Symbol | |
ID | 4092295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 950685 |
End bp | 951845 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638014146 |
Product | porin |
Protein accession | YP_620757 |
Protein GI | 107022430 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCA CGACCCTCTC GCTGATTTCG CTCGCGTCGT TCGCGGCGAT GCCCGTCGCG CATGCGCAAT CGAGCGTCAC GCTGTATGGC GTGATCGACA CGTCGATCAC CTATGTGAAT CACGCACAGG GCAAGGACAA CGCGTGGATG CTCGGCAACA GCAGCGCGGG TAACCTCGCC GGCAGCCGCT GGGGCGTGAA AGGCACCGAG GATCTCGGCG GCGGGCTGAA GGCACTGTTC CAGCTGGAAA ACGGCTTCGA CCCGAGCAAC GGCCGGCAGG GCCAGGGCGG CCGCCTGTTC GGCCGTCAGG CCTTCGTCGG CCTGACGAGC GACCGCTACG GCACGCTCAC GTTCGGCCGC CAGTACGACC CGCTCGTCGA CCTCGTGCAG GGCATCACCG CCGACAACTA CCTGGGCAGC GCGTTCGCGA CGCCGGGCGA CGTCGACAAC TACGACAACA GCTTCCGCGT CGACAACGCG GTGAAGTACA CGTCGGCCGT CTATTCGGGC CTGCAGTTCG CGGCGATGTA TTCGTTCGGC GGGATCGCCG GCAGCACCGG CGCCGCGCAG TCGTACTCGG CCGCCGTGTC GTACAACAAC GGGCCGTTCA GCGTCGCCGG CGGCTACTTC CACGCGACCA ACAGCCCCGC GTCAAACGGC GTGCGCAACG GCTGGACCAG CTCGTCGGAC GGCACGTTCG ACGGCCCGAT CAACAGCGGC TATGCCAGCG CGCACTCGTT CGGCATCGCG CGCATCGCGG GCCAGTACGT CGCCGGCCCG TTCACGTTCG GCGTCGGCTA CAGCAATGCG CAATACCGCC GCGACGCGAG CTCGGTGTTC GGCTCGAACG AGCACTACAA CACGGGGCAA GGCTTCGTGA ACTACCAGGC GACGAACGCG CTGCTCGTCG GTGTCGGCTA CAGCTACACG CGCTCGGGCG GCGACACGTC GGCGACCTAT CACCAGGTAT CGGCCGGCGC CGACTACAGC CTGTCGAAGC GCACCGACGT CTACCTGACC GCCGCGTATC AGCACGCAAG CGGCCAGACC GGCGACGGCA ACGGCGGCTC GATGGCCGCG CAGGCATCGA TCGGCTCGTA CGGTTATGCG GGCACGAGCT CGCAGACGAT GGTCAACCTC GGCCTGCGTC ACCGCTTCTG A
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Protein sequence | MKRTTLSLIS LASFAAMPVA HAQSSVTLYG VIDTSITYVN HAQGKDNAWM LGNSSAGNLA GSRWGVKGTE DLGGGLKALF QLENGFDPSN GRQGQGGRLF GRQAFVGLTS DRYGTLTFGR QYDPLVDLVQ GITADNYLGS AFATPGDVDN YDNSFRVDNA VKYTSAVYSG LQFAAMYSFG GIAGSTGAAQ SYSAAVSYNN GPFSVAGGYF HATNSPASNG VRNGWTSSSD GTFDGPINSG YASAHSFGIA RIAGQYVAGP FTFGVGYSNA QYRRDASSVF GSNEHYNTGQ GFVNYQATNA LLVGVGYSYT RSGGDTSATY HQVSAGADYS LSKRTDVYLT AAYQHASGQT GDGNGGSMAA QASIGSYGYA GTSSQTMVNL GLRHRF
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