Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0160 |
Symbol | |
ID | 4090824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 166989 |
End bp | 168188 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638013420 |
Product | major facilitator transporter |
Protein accession | YP_620047 |
Protein GI | 107021720 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCGC ATCACGACAA CCACCCTCCC CTTACCCGCG GCATGACGCT GCTGTTCGCG TGCGCGTGCG GCATCGTCAT CGGCAACATC TACTACGCGC AGCCGCTGCT CGCCGCGATC GCGCACAGCT TCGGCCGCGC GCCGACCGAA CTCGGCTATC TCGTCACGCT GACGCAGCTC GGCTATGCGG CCAGCCTGCT GCTGATCGTG CCGCTCGGCG ATGCGGTCAA CCGCCATACG CTGATCGTGC GGCTGCTGAT GCTCAACGTC GTCGCGCTGG TCGCGGTCAC GTTCAGCACC AACTTCACGA TGTTCGTCGT CGCGAACGTC GCGGTCGGCT TCGTCACCTG TTCGACGCAG CTGCTCGTGC CGTTCGCGGC GTCGCTCGCC GATGCGCGCT CGCGCGGCCG CGCGGTCGGC ACCGTGATGA GCGGGCTCCT GCTCGGCATC CTGCTCGCGC GCGTCGCGGC CGGCGCGATC GCCGACGGGT TCGGCTGGCG CGCGGTGTAC GGCATCGCCG CGGCGATGGT GCTCGCGCTG ACCGTCGTGC TCGCCGTGAA GCTGCCGAAG GATCGCCGCG ACGCGCGCGT CGACTATCCG GCGCTGATGA CCTCGCTCGT CGCGCTGGTG CGCGCGCAGC CGCTGATCGC GCTGCGCTCG ACCTACGGCG CGCTCGTGTT CGCGTGCTTC AGCCTGTTGT GGACCGGCCT CACGTTCCTG CTGAGCCAGC CGCCGTACAG CTACTCCGAA GGACAGATCG GCCTGTTCGG CATCGTCGGC GCGGTGGGCG CGCTCGCGGC GACGTCGGCC GGCCGGTTCG TCGATCGCGG TCACGGCAAT GCGGCGACCG GCCTGTTCGC GGCGGCCGTG CTCGGCTCGT TCGCGCTGAT CGCGACCGGC GCGCATTCGC TCGCGGCGCT GATCGCGGGC ATCCTGCTGC TCGACGTCGG CGTGCAGGGC ATGCACATCT CGAACCAGAG CGTGATCTAT GCGCTCGCCG GCCATGCGCG CAGCCGCGTG ACGACGATCT ACCTGACGAG CTACTTCATC GGCGGCGCGC TCGGCTCGTT CGCCGCGAGC GTCGCGTACG GCCTCGACGG CTGGCGCGGC GTGTGTATCG CGGGTGCGGC GCTGTCGGGC GTGCTGATCG CGCTGTGGCT CGCGTCGCAG CGCGTCGGCT CGCGGCAGGT CACGCAGTGA
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Protein sequence | MEPHHDNHPP LTRGMTLLFA CACGIVIGNI YYAQPLLAAI AHSFGRAPTE LGYLVTLTQL GYAASLLLIV PLGDAVNRHT LIVRLLMLNV VALVAVTFST NFTMFVVANV AVGFVTCSTQ LLVPFAASLA DARSRGRAVG TVMSGLLLGI LLARVAAGAI ADGFGWRAVY GIAAAMVLAL TVVLAVKLPK DRRDARVDYP ALMTSLVALV RAQPLIALRS TYGALVFACF SLLWTGLTFL LSQPPYSYSE GQIGLFGIVG AVGALAATSA GRFVDRGHGN AATGLFAAAV LGSFALIATG AHSLAALIAG ILLLDVGVQG MHISNQSVIY ALAGHARSRV TTIYLTSYFI GGALGSFAAS VAYGLDGWRG VCIAGAALSG VLIALWLASQ RVGSRQVTQ
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