Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0826 |
Symbol | |
ID | 4447981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 926979 |
End bp | 927962 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639692850 |
Product | LysR family transcriptional regulator |
Protein accession | YP_834472 |
Protein GI | 116688849 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.325124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGA TTCAGACCAT GCGTGTATTC GTCTGCGTCG CCGAGCAGCA AAGCTTCCGG CGCGCGGCGC ACCATCTCGG CGTGTCCAAT GCGCTCGTCA CGCGTTCGAT CGCGATGCTC GAGGGCCACC TGAACACACG GCTGATCCAT CGCACCACGC GCAACCTGTC GCTCACCGAG GCCGGCGTGC GCTACCTCGA TGGTTGCCGC GCGCTGCTCG AGGAATTCGA CCACCTCGAA TCGTCCGTCG CGCATGCCGT GCGCGAACCG GCCGGCACGC TGCGCGTCGT CGCGTCGGGG CTGCTGTCGC CGCTGGCGCT GACGCCGCTC GTCAGCAGCT TCCGGCACCG CTACCCCGAG CTGCGCGTGC AGCTGACCGT CGCCGAAGGG CCGCTCGACG TGCTCGATTC CGGCTACGAC GTCGGCATCG TCACCGGCAC CCGGCTCGAC GGCAACCCGA CGCTGATCGG CCATGCGCTC GCGCCGAACC CGTTCGTCGC GTGCGCGGCG CCGGCCTATC TCGACCGCCG CGGCGAGCCG CGCGTGCCCG ACGACCTGCC GGGCCACGAC TGGGTCACGC TCGCGCCGCA CCAGCACGCG CCGACGTGGC AACTGGTCGG CCACGACGGC GTCGCCCATT CGGTCACGGT GCGCCCGGCC TGCACGGTCA ACCAGCTCGC GCTCGTCCAG GCGGCGGCCG TGGCCGGCGC CGGCATCGCG GTGCTGCCCG AGCCGTGCGT CGCCGACGCG CTCAACCACG GCACGCTCGT GCGGCTGATG GCCGGCTACC GGATCGACGA TCCCGACACG CAGTTGTCGC TCGTCTATCC GAACCGCCAG TACGTGCCGG CCCGCACCCG CAGCTTCGTC GAGCACGCGC TCGAGCACTT CAGCGCGCCG GCCGCCCGCG AGCAGGCGGA TTACGGCTTC CTGCGGCCGG TACGCGGCCC CGAACGCTCC GACATCGTCA CGGGGCTGCA GTAA
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Protein sequence | MNQIQTMRVF VCVAEQQSFR RAAHHLGVSN ALVTRSIAML EGHLNTRLIH RTTRNLSLTE AGVRYLDGCR ALLEEFDHLE SSVAHAVREP AGTLRVVASG LLSPLALTPL VSSFRHRYPE LRVQLTVAEG PLDVLDSGYD VGIVTGTRLD GNPTLIGHAL APNPFVACAA PAYLDRRGEP RVPDDLPGHD WVTLAPHQHA PTWQLVGHDG VAHSVTVRPA CTVNQLALVQ AAAVAGAGIA VLPEPCVADA LNHGTLVRLM AGYRIDDPDT QLSLVYPNRQ YVPARTRSFV EHALEHFSAP AAREQADYGF LRPVRGPERS DIVTGLQ
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