| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6635 |
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| Symbol | |
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| ID | 4308469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008385 |
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| Strand | - |
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| Start bp | 42600 |
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| End bp | 43562 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638147774 |
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| Product | conjugal transfer ATPase TrbB |
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| Protein accession | YP_771712 |
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| Protein GI | 115345527 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000001277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC AGAAACCAGA ACACAACAGC ATCAAGGAAC GGGCGAAGAA GAAGCTCGAA
CGCGACATGG GGCCGGAGCT GCTGGCCGCC CTCAACGATC CCAAGACCGT TGAAATCATG
CTCAACGCGG ACGGCAAGCT CTGGCTCGAA CGCCTGGGCG AGCCGATGAA GTGCATCGGC
ACGCTGCGCG TCGCGCAGGC GCAAGCCATC ATCGAAACCA TCGCGGGCTA CCACGGCAAG
GAAGTCACGC GCTCCAAGCC GATCCTGGAA GGCGAGCTGC CCCTTGATGG CAGTCGCTTC
GCCGGCCAGC TCCCGCCGGT TGTGCCCGCA CCCACCTTCG CCATTCGGAA GAAGGCCGTC
GCCATCTTCA CGCTCGATCA GTACGTCGAA CGCGGAATCA TGACCGCGCC GCAGCGCGAG
GCATTGATTG CAGCGGTGCG CGCGCACCGG AACATCCTTG TGATCGGCGG CACCGGCTCG
GGCAAGACCA CGCTGGTGAA CGCGATCATC AACGAGATGG TGATTCAAGA CCCGACCGAG
CGGGTTTTCA TCATCGAGGA CACCGGCGAA ATCCAGTGCG CCGCCGAGAA CTACGTCCAG
TACCACACCA GCATCGACGT GAACATGACG GCGCTGCTGA AAACCACCCT CCGCATGCGC
CCCGACCGAA TCCTGGTCGG CGAGGTGCGC GGCCCCGAAG CCCTTGATCT GTTGATGGCC
TGGAACACCG GGCACGAAGG AGGTGCTGCA ACCCTGCACG CAAACAACGC CAAAGCTGGA
TTGGATCGGC TCGCCATGCT CATCAGCATG CACCCCGATT CCCCGAAACC CATTGAACCG
CTTATCGGCG AGGCGGTTCA CGTGGTTGTT CATATCGCCC GCGTCGAAGG CTCGCGGCGC
ATCCAGGAAA TCTTGGAGGT TTCCGGGTTC GCCAACGGCC AGTACATCAC CAAAACCCTC
TGA
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| Protein sequence | MTDQKPEHNS IKERAKKKLE RDMGPELLAA LNDPKTVEIM LNADGKLWLE RLGEPMKCIG
TLRVAQAQAI IETIAGYHGK EVTRSKPILE GELPLDGSRF AGQLPPVVPA PTFAIRKKAV
AIFTLDQYVE RGIMTAPQRE ALIAAVRAHR NILVIGGTGS GKTTLVNAII NEMVIQDPTE
RVFIIEDTGE IQCAAENYVQ YHTSIDVNMT ALLKTTLRMR PDRILVGEVR GPEALDLLMA
WNTGHEGGAA TLHANNAKAG LDRLAMLISM HPDSPKPIEP LIGEAVHVVV HIARVEGSRR
IQEILEVSGF ANGQYITKTL
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