Gene Bamb_6133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6133 
Symbol 
ID4315037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp693463 
End bp694536 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content72% 
IMG OID638153977 
Producttaurine catabolism dioxygenase TauD/TfdA 
Protein accessionYP_778011 
Protein GI115360874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.165198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00922022 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGATC TCGCCTTCCT CGCCGCGCAC GCCGCGATGC GGCTCGGCGC CGACGACGTC 
CACTGCGCGG CGGTCGCGCC CGGCGCGACG CTGCCGCTGT GCGTGACGCC GCGCAGCGCG
GAACTCGCGA CGTCGCCGGA GATGTTCGTC GCGTGGTACC GCTCGCGGCT CGATACGATC
GACACGCTGC TCGACGCGTG CGGCGCGCTG TTGTGGCGCG GCTTCGCGGT GCCCGACACC
GCCGCGTTCG GCCGCCTCGG CGCGCTGTAT CCGGCACACG CGCACGGCTA CACGGCGGGC
GCCGCGCCGC GCAGGCAGCT CGACGGCCAG GTGTACGAGT CGACGCGCAT GCCGCCGCCG
TTCAAGATCG GTCTGCATCA GGAAATGGCC TATATGCCCG CGTTCCCGCG CCTCGTCGCG
TTCTATTGCC GGCAGCCGGC CGACGCGGGC GGCGAAACGC CGATCTGCGA CATGCGGCGC
GTGACGGCGC GTGTGCCGCC CGCGCTGCGT GAGCGGTTCG CCGCGCGCGG CGTGATGTAC
CTGCGCAATT TCGCGGCGCC CGGCGATCGC GCGCACGGCC TCGCCGCCAA TCCGAACCTG
CCGTTCGCCG AATACCACCG GCCGTGGGAC GACGCGTTCG GCACGACCGA GCGTGACGAG
GTCGAGCGGC TGTGCGCGGC GCGCGGCGTC GGCTGTCGCT GGCTCGACGA CGGCAGCGTG
ACTGTCTCGC ACGTCGGCAG CGCGCTGCGC GCGCATCCGC GCACCGGCGA GACGGTGTGG
TTCAACCAGG CGAGCGCCCA GCACCCGAAC CCGCGCTCGA TGGGCGAACT CAGCTATCGC
TACCTGCAGC GCGTGTACGG CACGCGCGCG GCGTTCCCGT ATGAAATCCG CTATGGCGAC
GGCTCGCCGA TGCCGTTCGA CGATCTGGTG GCCGTCTACG ACGCGTTCGA CGACGAGGAG
CTGTCGTTCC CGTGGCAGGC CGGCGACGTG CTCGTCGTCG ACAACATGCT GGTCGCGCAC
GGCCGCAACC CGTACCGGGG CGCGCGCGAC ACGCAGGTCA TGCTGTTCGA CTGA
 
Protein sequence
MTDLAFLAAH AAMRLGADDV HCAAVAPGAT LPLCVTPRSA ELATSPEMFV AWYRSRLDTI 
DTLLDACGAL LWRGFAVPDT AAFGRLGALY PAHAHGYTAG AAPRRQLDGQ VYESTRMPPP
FKIGLHQEMA YMPAFPRLVA FYCRQPADAG GETPICDMRR VTARVPPALR ERFAARGVMY
LRNFAAPGDR AHGLAANPNL PFAEYHRPWD DAFGTTERDE VERLCAARGV GCRWLDDGSV
TVSHVGSALR AHPRTGETVW FNQASAQHPN PRSMGELSYR YLQRVYGTRA AFPYEIRYGD
GSPMPFDDLV AVYDAFDDEE LSFPWQAGDV LVVDNMLVAH GRNPYRGARD TQVMLFD