| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5912 |
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| Symbol | |
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| ID | 4314817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 394800 |
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| End bp | 395627 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638153752 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_777791 |
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| Protein GI | 115360654 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.2156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00155667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACTTCT TCCAGCCGGT TCCCCTCGCG CTCGCCCACC TGACGGCACT CGATCTGCCG
CCGCCCGAGC TCGTCACCGC GGCGGCGGCG GCCGGTTACG CGGCGGTCGG CCTGCGGCTG
TACCCGGCCT TCGCCGGTTC GCGCTTCTAC TCGCTGCCGG CCGGCTCGGC TGCGATCGCC
GAGGTACGGC ATCGCCTCGA CGCCACCGGC CTCACGGTCA ACGACATCGA GTTCATCGGC
ATCGGCGCCG ACTTCGACGC CGCCGCGCTC GACCCGCTGC TGGAGACGGC GGCCGAGCTC
GGCGCGCGCT GCCTCAGCGT GTGCGGGGAC GATCCCGAGC GCGCCCGGCT GAGCGCGAAC
TTCGCCCGCC TTTGCGAGCG GGCGGCCCCG TTCGGCCTGC GCGTCGAACT CGAATTCATG
GCCTGGCGCG CGGTCGCCCG CTTCGGCGAT GCCGCCGAGG TGGTGACGGC GGCGCGCCAG
CCCAATGGCG GCATGCTGAT CGACGCGCTG CATGTGTGGC GCACCGGCGG CTCCGAGCGC
GACCTCGGCA GCGTGCCGGC CGCGATGATC CGCACCGCGC AGCTCTGCGA CGCGCCGGCC
GCGCCGCCGC CCACGTCCGA GGCGCTGCTC GAGGAGGCCC GCGCCGGTCG GCTCGCGCCG
GGCCGGGGCG GGCTGCCCGT GGCCGCCCTG CTGGCCGCGC TGCCCGACGA CACCGCGCTG
TCGCTCGAAG TGCCCGGCGG CGGGCAGGTC CCGCTCGAAC GCCATGTGCG CGAGGTGTTC
GAGGCGACGC GGAACCTGAT CGCCTCGCTC GCGACGGTGC GCTCATGA
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| Protein sequence | MDFFQPVPLA LAHLTALDLP PPELVTAAAA AGYAAVGLRL YPAFAGSRFY SLPAGSAAIA
EVRHRLDATG LTVNDIEFIG IGADFDAAAL DPLLETAAEL GARCLSVCGD DPERARLSAN
FARLCERAAP FGLRVELEFM AWRAVARFGD AAEVVTAARQ PNGGMLIDAL HVWRTGGSER
DLGSVPAAMI RTAQLCDAPA APPPTSEALL EEARAGRLAP GRGGLPVAAL LAALPDDTAL
SLEVPGGGQV PLERHVREVF EATRNLIASL ATVRS
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