| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5911 |
|---|
| Symbol | |
|---|
| ID | 4314816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 394310 |
|---|
| End bp | 394657 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638153751 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_777790 |
|---|
| Protein GI | 115360653 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.116094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00152039 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCA AGAGAGAACT GAAACAGCAG TACAAGGACA CGCCGCGCCT GATGGGCGTC
TACCGCGTCG TCAACAAGAC CACCGGGCGC TCGCTGGTGG AGGTCGGCCG CGATGTCAAT
GCCCGCCTGA ACCGGCACCT GACCGAACTG CGCTTCGGCA AGCACCCGAA CCGGCAGTTG
CAGGCCGACT GGAACCTGCT CGGCGCCGAG GCCTTCGACT TCGAGCTGAT CGAGGCCCTC
AAGCCGCTCG ACAAGCCCGA CTACGACCCA GAGGAGGACC TCGAACTGCT GCTCGCGATG
ACGCTCGAGC GCAGCGAGTT CGACAAGGAG CGTCTCTACA ACCGCTGA
|
|---|
| Protein sequence | MDRKRELKQQ YKDTPRLMGV YRVVNKTTGR SLVEVGRDVN ARLNRHLTEL RFGKHPNRQL
QADWNLLGAE AFDFELIEAL KPLDKPDYDP EEDLELLLAM TLERSEFDKE RLYNR
|
|---|
| |