Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5634 |
Symbol | |
ID | 4314501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 67629 |
End bp | 68240 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638153476 |
Product | hypothetical protein |
Protein accession | YP_777515 |
Protein GI | 115360378 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00782523 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0387967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAC CCAACTGGAC GATCGCGGCG CTCGCCGCGG GCGTGCTCGC CGTGTCGGGA CTCGCGCACG CACAGATGCC GAGCGAGCCG CCCGCATCGA ATTCGCATGT GCCGGGCGGC GTGATCAACC CGTCGTCGGG CGCCGCCACG GGCGACGCCG GCATGGCGAA GGCGCCGCAG GGCGGCGACG CGGAATTCAT CGACAAGGCC GCGATGGCCG GCAAGGCCGA GGTGCAGGCG AGCCAGCTCG CGTTGAAGCA GGCGCAGTCG GCCGACGTGC GCGCATTCGC GAAACGCATG GTGGCCGATC ACAGCAAGGC GAACGCGAAG CTCACCCAGA TCGCCGCGCG CAAGGGCATG AAGCCGCAGG TCGAGCAGAT CTCGGATCCG GACGTCGAGG CGCTGCGCGG CAAGAGCGGC CACGACTTCG ACACCGCGTA TGTCGCGGCG GCCGGCCCCG ACGCGCACCG CAAGGCGGTC GCGCTGTTCG AAGGCGAGGC GCGCGACGGC AAGGACGCGC AGCTGCGCGC ATTCGCGAAA GCCACGCTGC CGACGCTCAA GCATCACCTG AGCATGGCGG AGGCGCTCCA ACGCAAGGTG GGCGCGCAGT AA
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Protein sequence | MKQPNWTIAA LAAGVLAVSG LAHAQMPSEP PASNSHVPGG VINPSSGAAT GDAGMAKAPQ GGDAEFIDKA AMAGKAEVQA SQLALKQAQS ADVRAFAKRM VADHSKANAK LTQIAARKGM KPQVEQISDP DVEALRGKSG HDFDTAYVAA AGPDAHRKAV ALFEGEARDG KDAQLRAFAK ATLPTLKHHL SMAEALQRKV GAQ
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