Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3589 |
Symbol | |
ID | 4312485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 416436 |
End bp | 419267 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638151431 |
Product | hypothetical protein |
Protein accession | YP_775477 |
Protein GI | 115358339 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00513024 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.358288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAACG CAATTATCAT TGCAGCAGAA AAATCCCCGT TCCTGGCCGG CGAACTGAAT GCCTTCGGTC GCGACCCCGA CTGGGAGTTC GTAAAGGGGG AGGCAAATAA GGGAATCTTT ACTGATTCGT CCAAGAAGAA GATCGCTTTT GATCCTACAT GGAGCGAATC TGCAACCTTA TTCGCCACCA CGCTGGCGCA TGAACTCGGA CACGCGCTGC TGCCAGGCGG GACGGGCGGT TCTTTGGCAC TGAATCCGGA TCAGGCCGTC GCGAATGGTT TGTCGAACGA AGGGGTTGCG CTCCTTTCCG AATATATTGT GGCCATCCAG TTGGGGTTGA CCGGTGGTGC GGCCGGCCAC ATGCATTCGG ACCAATCCGA CAGTCGGCTG ACGCTGCAAC TGAATCAACT GGCTCAGTCG GTTGGCATCG ACGTCAAAAG CGTGACGTGG GGATCTGCTG CCGCTCACGC GCTCGCCGAT TCGGATTCGG CCCTAGTCGA TGCTGCGGGG AAATACTACG GCACCGTCCA TCCGTCCCCG GCCTTGCAAC TGACGTATAG CCAGTTTTAT GCGGATTGGT GGATTATCCA GCATTCCGGC ATGGATCCGA ATCTCGTCGA CTGGCAGAAG GTCCAGGCCG ACATGATCAA GTACACCAAC TTCACACTTG ATGGCCAGCC GGTATTCACG ATTGATACGA AGGGCATTCC GCTGCTGGAT GGCGGATGGG CGGTGGTGAA TGGCGAAATT TCGCTGAAAG GAGTCGTAAC AAAGACTCTT TTTAATGCCG ACGGCAAAAT CCAGGAGCAA GCGAAATACG ACTACACGGG ATTCAAGTTT CAGAATATGC TTTTTGGGGG AGACGGCAAG GCAACCCATC GGTACGACTT TAAGCTCGAT AACAGCTACA CGAAGTATGA TTTCGCCGCT GATGGTTCGC AGACTGCATC GCTATACGGC ACGACCGGCC AGATGATCGA GTATGCGAAG TTCAATGCCA ATGGTTTCAA GACGCTGGAC ATCTTCTATG GCGCGGATGG TAACGCCACG CAACAATACA ACTTCAACCT TGACAAGAGC TATACGAAGT ACGATTTCAA TGCTAATGGT TCCCAGACCG CAACGTTGTA TGGCGTGAAC GGCAAGATAA CCGAGTACGC GAAGTTCAAC GCCGATGGCT TCAAGACACT GGACATCTTC TACGGAGCGA ATGGCAAGGC GGTACAGCAG TACAACTTCA ATCTGGATAA GAGCTACACG AAGTACGACT TCGCCGCCGA TGGTTCACAG ACCGCCTCGC TGTACGGCAC GACCGGCCAG ATGACCGAGT ACGCGAAGTT CAACGCCAAC GGTTTCAAGA CGCTGGATAT CTTCTACGGC GCGAACGGCA AGGCCACGCA GCAGTACAAC TTCAATCTGG ATAAGAGCTA CACGAAGTAC GACTTCGCTG CCGACGGCTC CCAGACCGCG ACGCTGTACG GCACGACCGG TCAGCTAACC GAGTACGCGA AGTTCAATGC CGACGGCTTC AAGACACTGG ACATCTTCTA CGGAGCGAAT GGCAAGGCGG TACAGCAGTA CAACTTCAAT TTGGACAAGA GCTACACGAA GTACGACTTC GCCGCCGATG GTTCCCAAAC GGCGACGCTG TACGGCACGA CCGGCCAGAT AACCGAGTAT GCGAAGTTCA ACGCCAACGG CAACAAGACG CTGGACATCT TCTACGGTGC TGACGGCAAG GCCACGCAGC AGTACAACTT CAATTTGGAC AAGAGCTACA CGAAGTACGA CTTCGCCGCC GATGGTTCCC AAACGGCGAC GCTGTACGGC ACGACCGGTC AGCTAACCGA GTACGCGAAG TTCAACGCCA ACGGCTTCAA GACGCTGGAC ATTTTCTACG GTGCTGACGG CAAGGCGACG CAGCAATACA ACTTCAACCT CGACAAGAGC TACACGAAGT ACGACTTTGC TGCCGATGGC TCCCAGACCG CGACGCTGTA CGGCGCGGCT GGCCAGGTTA CCGAGTACGC GAAGTTCAAC GCCAACGGCA ACAAAACACT GGACATCTTC TACGGTGCTG ACGGCAAGGC GACGCAACAG TACAACTTCA ACCTGGACAA GAGCTACACA AAGTACGACT TCAATGCCGA CGGCTCGCAA ACGGCGACGT TTTTCGGCGT CAATGGTCAA GTGAGCGAGT ATGCGAAATT CAACGCAGCC GGTGTCAAGA CGCAGGATAT CGTCTTTGGC GCGGACGGAA AGGCAACCAA GCAGATCGAC TTCAATATCG ATGGCAGCTA CGCCTCTCAC GTCTTTAATA GCGATGGCTC ACAATTCGCA GCGCTGTTCG GCACCAATGG ACAGATGACA GAATATGCGA CATTTAATGC GGGCGGGTTC AAGACACAAG ACATTTTTTA CTCGAACGGA CGGGCGACGC ATCGGTACGA TTTTGCTCTT GACAAGAGTT TCATCGCTCA TGTGTTTGAC GGTTCAGATG AAATGGTCGC ACTTTTCGGT GTGAACCATA TTGTTTATGA TTATTATAAG TATTCCTATG GAAAACTATT CGAACGTGAC ATATTCGATG GTCTGGGGCG TCAGATCGAG GCTGACCGCT TTAGCACCTC AACGGGCAAG CTTACCGGGT TCTCAAAGTT CACGTACAAC AGTGATGGCA CGTACAATGC AAAAAGCTAT GATTCATCGG GACACTTGAC CGCCAGTTCA AACTACACCG GCGACGGACA CTTGATCCAG AACAACACCA TCTATATTCC CGGAAGTAGC GGCTTCCCTT CTGCTCAATT GTGGTGGGGG TTCCAGATCT GA
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Protein sequence | MYNAIIIAAE KSPFLAGELN AFGRDPDWEF VKGEANKGIF TDSSKKKIAF DPTWSESATL FATTLAHELG HALLPGGTGG SLALNPDQAV ANGLSNEGVA LLSEYIVAIQ LGLTGGAAGH MHSDQSDSRL TLQLNQLAQS VGIDVKSVTW GSAAAHALAD SDSALVDAAG KYYGTVHPSP ALQLTYSQFY ADWWIIQHSG MDPNLVDWQK VQADMIKYTN FTLDGQPVFT IDTKGIPLLD GGWAVVNGEI SLKGVVTKTL FNADGKIQEQ AKYDYTGFKF QNMLFGGDGK ATHRYDFKLD NSYTKYDFAA DGSQTASLYG TTGQMIEYAK FNANGFKTLD IFYGADGNAT QQYNFNLDKS YTKYDFNANG SQTATLYGVN GKITEYAKFN ADGFKTLDIF YGANGKAVQQ YNFNLDKSYT KYDFAADGSQ TASLYGTTGQ MTEYAKFNAN GFKTLDIFYG ANGKATQQYN FNLDKSYTKY DFAADGSQTA TLYGTTGQLT EYAKFNADGF KTLDIFYGAN GKAVQQYNFN LDKSYTKYDF AADGSQTATL YGTTGQITEY AKFNANGNKT LDIFYGADGK ATQQYNFNLD KSYTKYDFAA DGSQTATLYG TTGQLTEYAK FNANGFKTLD IFYGADGKAT QQYNFNLDKS YTKYDFAADG SQTATLYGAA GQVTEYAKFN ANGNKTLDIF YGADGKATQQ YNFNLDKSYT KYDFNADGSQ TATFFGVNGQ VSEYAKFNAA GVKTQDIVFG ADGKATKQID FNIDGSYASH VFNSDGSQFA ALFGTNGQMT EYATFNAGGF KTQDIFYSNG RATHRYDFAL DKSFIAHVFD GSDEMVALFG VNHIVYDYYK YSYGKLFERD IFDGLGRQIE ADRFSTSTGK LTGFSKFTYN SDGTYNAKSY DSSGHLTASS NYTGDGHLIQ NNTIYIPGSS GFPSAQLWWG FQI
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