| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3514 |
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| Symbol | |
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| ID | 4312410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 324593 |
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| End bp | 326686 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638151356 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_775402 |
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| Protein GI | 115358264 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000898006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCA GACGGACCTT CATGTGCGGA TGCATGGGCG CATTTGCCGC CTGTTCGCTG
TTCCCGGGCG TGAGCAATGC CAAGATGATC GACCTGCTGC CGCCGTCCGA TCCGGCCGAC
GGCAAGACGT TTCGCGTGAT CTGCCTGCAT GACGTGCGTG ACAATCTGAT GGCGTCGTTC
ACCTCCCCGT CGGCGATGGT CGACCCGTTC GCCGTCGATA CCGGCACGCT GACCGCCATC
TTCTCGTGGC TGCAGACCAA CAACTACCAC ACCATCACGG TCAAGCAGAT CGAGGAGTCG
CGGCACGGCG GCAAGCCGCT GCCGCCGCGC TCGGTGCTGC TCACGTTCGA CGACGGCTTT
CGCAGCCACT ACACGAAGGT GCTGCCGCTG CTCGAGCGCT TCAAGTATCC GGCCGTGATG
GGCATCGTCA CCGCGTGGAT CGATACACCG CCGAATGCGC CGATCCGCAT CAGCGACAAG
GTGCAGGTGC CGCGCGACTA CTTCCTGTCG TGGGACGAGG TGAAGAAGCT CGGCCAGTCG
CATCTCGTCG AGCTCGGCTG CCACACCCAC AACCTCCATC ACGGCGCGAT CGCGAACCCG
CAAGGCAACG AGTTGCCGGC GACCACCTCG CACCTCTACC TGCAGGACCA GAAGCGCTAT
GAAACCGACG CCGAATTCGA AGCGCGCGTG CACAACGACC TGCAGACCTG CGTGCGGCAG
ATCCGCGAAC ACACCGGCAT CGTCGCACGC TCGATGGTGT GGCCATACGG CGCGGAAAAC
CAGCCCGTGC GCAAGATATC GACGTCGCTC GGCATGGACA TCCAGTTCAG CCTCGACGCC
GGCCCGAACA CGCCGGACGT GCCGCTGGAC CGCTTGAGAC GGATCCTGAT GATGTACGAC
GTCGACATCG GCGGGTTCGA ACGCTCGATG CGCGAGCCGG CATCCAACCG CGGTGACGTC
GACGTGCCCG AGCGCACCGT GCAGGTCGAT CTCGACCAGG TCTACGATCC GGATCCCGCG
CGGCAGGAAG CGAATCTCGG CAAGCTGATC GAACGCATCT ACCGGATGCA GCCGAAATCG
GTGTACCTGC AGGCGTATGC GGATCCGAAA GGCACCGGTG TGGCCGAAGC CGTGTATTTC
CCGAACCGGC ACCTGCCGAT GCGCTCCGAC CTGTTCTCGC GCGCCGCGTG GCAGCTCAAC
ACGCGCGCCA ACGTGCAGGT GTACGCATGG ATGCCGGTGC TCGCGTTCCG GCCGCCGGCG
GACAAGCAGC GCGGGCTCGA GGCCGTGAGC GCCTACGGCG GCGCGCCGGC GCGCGAGAAC
GGCACGCGCG TGTTCCGGCT GAGCCCGTTC GATCCGGAAG CGCGGCTGAT GATCCAGCAG
ATCTACGAGG ATCTCACCAA GCACGCATCG TTCAGCGGCA TCCTGTTCGG CGACGACGCC
GTGCTCGACG ACTACGAGGA TGCGGGCAAG CATGCGCTGC GCACCTATTC GCAGTGGGGG
TTGCCGGCCG ATATCGGCAA GATCCGCGAG AACCCCGACC TGATGAAGCG CTGGACGCGC
CAGAAGTCGC GCTATCTCGT CGACCTGACC CGCCAGCTCT CGCAGATCGT GCTGGCCCAC
CAGAATGCGG GCGATGTGCT GACCGCACGC AACATCTTCG CGATGCCGGT GCTCAAGCCC
GAATCGGAAG CGTGGTACGC GCAGAACTAC GACGATTTCC TCGCGACCTA CGACTACGTC
GCGCTGATGG CGATGCCGTA CATGGAACAG GCGAAGGATC CCGAAAGCTG GCTCGACCAG
CTCGTGCAGG CCGTCCATGC GAAGCCGCGC GGCCTGGAGC GCACCGTGTT CGAACTGCAG
TCGTACGACT GGCGCGCGCG CAAAGAGGTA CCGGCCAACA CGCTGCTCGC GCAGATGCGG
CGGCTGCGCA GCAAGGGCGC GGTGAATTTC GGCTACTACC CGGACAACTT CCTGAACGGC
CAGCCGCAGC TCGAAGCGAT GCGCGACGTG ATGTCGTTGA AGTCCCGCCT CGACCAGAAC
TCGATCAACG CGCTGATGCA GATGCAGCAC ACGCCCGGAA CCAAGACGCC ATGA
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| Protein sequence | MQSRRTFMCG CMGAFAACSL FPGVSNAKMI DLLPPSDPAD GKTFRVICLH DVRDNLMASF
TSPSAMVDPF AVDTGTLTAI FSWLQTNNYH TITVKQIEES RHGGKPLPPR SVLLTFDDGF
RSHYTKVLPL LERFKYPAVM GIVTAWIDTP PNAPIRISDK VQVPRDYFLS WDEVKKLGQS
HLVELGCHTH NLHHGAIANP QGNELPATTS HLYLQDQKRY ETDAEFEARV HNDLQTCVRQ
IREHTGIVAR SMVWPYGAEN QPVRKISTSL GMDIQFSLDA GPNTPDVPLD RLRRILMMYD
VDIGGFERSM REPASNRGDV DVPERTVQVD LDQVYDPDPA RQEANLGKLI ERIYRMQPKS
VYLQAYADPK GTGVAEAVYF PNRHLPMRSD LFSRAAWQLN TRANVQVYAW MPVLAFRPPA
DKQRGLEAVS AYGGAPAREN GTRVFRLSPF DPEARLMIQQ IYEDLTKHAS FSGILFGDDA
VLDDYEDAGK HALRTYSQWG LPADIGKIRE NPDLMKRWTR QKSRYLVDLT RQLSQIVLAH
QNAGDVLTAR NIFAMPVLKP ESEAWYAQNY DDFLATYDYV ALMAMPYMEQ AKDPESWLDQ
LVQAVHAKPR GLERTVFELQ SYDWRARKEV PANTLLAQMR RLRSKGAVNF GYYPDNFLNG
QPQLEAMRDV MSLKSRLDQN SINALMQMQH TPGTKTP
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