Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3316 |
Symbol | gltA |
ID | 4312318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 106792 |
End bp | 108093 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638151158 |
Product | type II citrate synthase |
Protein accession | YP_775205 |
Protein GI | 115358067 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.229262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.697255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCGT CTGATGTTAA AGCCACGCTA TCGTTCAGCG ACAACTCGCC GAGCGTCGAA ATGCCGATCT ACAAGGGGAC GATGGGCCCG GACGTGATCG ACATCCGCAA GCTGTACGGC CAGACCGGCA AGTTCACTTA CGACCCGGGC TTCATGTCGA CGGCAGCTTG TAATTCGGCG ATCACGTACA TCGACGGCGA CAAGGGCGAA CTGCTGTACC GCGGCTACCC GATCGACAAC CTCGCGCAGA ACGCCGACTT CCTTGAGACC TGCTACCTGC TGCTGAAGGG CGAGCTGCCG AACGCCGCGC AAAAGAAGGA ATTCGTCGAC ACCGTCACGA AGCACACGAT GGTGCACGAG CAGATGCACT TCTTCTTCCG TGGCTTCCGT CGCGACGCGC ACCCGATGGC GGTGCTGGTG GCGGCCGTCG GCGCGCTGTC GGCGTTCTAC CACGACTCGC TCGACATCAA CGATCCGCGT CACCGTGAAG TATCGGCGAT CCGCATGATC GCGAAGCTGC CGACGCTCGT CGCGATGGCG TACAAGTTCA GCATCGGCCA GCCGTTCGTT TATCCGAAGA ACGAACTGTC GTACAGCGCG AACTTCATGC ACATGATGTT CTCGAACCCG TGCGAAGAGT ACAAGGTCAA CGACGTGCTC GTGCGCGCGC TCGACCGTAT CCTGATCCTG CACGCCGATC ACGAGCAGAA CGCATCGACG TCGACGGTCC GCCTGGCCGG CTCGTCGGGC GCGAACCCGT TCGCGTGTAT CGCTGCCGGT ATCGCATGTC TGTGGGGCCC GGCGCACGGT GGTGCGAACG AAGCCGCGCT GAACATGCTC GAGCAAATCG GTTCGCCGGA CAACATCCCC GAATTCATCA AGCAGGTGAA GGACAAGAAT TCGGGCGTGA AGCTGATGGG TTTCGGCCAC CGCGTGTACA AGAACTACGA CCCGCGTGCG AAGCTGATGC GCGAGACGTG CTACGAAGTG CTGAACGAAC TGGGCCTGCA CGACGACCCG CTGTTCAAGC TCGCGATGCA GCTCGAGAAG ATCGCGCTGG AAGACGAATA CTTCGTGTCG CGCAAGCTGT ACCCGAACGT CGACTTCTAC TCGGGCATCG TTCAGCGCGC GCTGGGCATC CCGACGTCGA TGTTCACGTG TATCTTCGCG ATGGCACGTA CGGTCGGCTG GATCGCACAG TGGAACGAAA TGATTGCGGA TCCGGAGCAG AAGATCGGCC GTCCGCGTCA GCTGTTCATC GGCGACGCGC CGCGCGAAGC GAAGCCGATC AACGCACGTT AA
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Protein sequence | MTPSDVKATL SFSDNSPSVE MPIYKGTMGP DVIDIRKLYG QTGKFTYDPG FMSTAACNSA ITYIDGDKGE LLYRGYPIDN LAQNADFLET CYLLLKGELP NAAQKKEFVD TVTKHTMVHE QMHFFFRGFR RDAHPMAVLV AAVGALSAFY HDSLDINDPR HREVSAIRMI AKLPTLVAMA YKFSIGQPFV YPKNELSYSA NFMHMMFSNP CEEYKVNDVL VRALDRILIL HADHEQNAST STVRLAGSSG ANPFACIAAG IACLWGPAHG GANEAALNML EQIGSPDNIP EFIKQVKDKN SGVKLMGFGH RVYKNYDPRA KLMRETCYEV LNELGLHDDP LFKLAMQLEK IALEDEYFVS RKLYPNVDFY SGIVQRALGI PTSMFTCIFA MARTVGWIAQ WNEMIADPEQ KIGRPRQLFI GDAPREAKPI NAR
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