Gene Bamb_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3316 
SymbolgltA 
ID4312318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp106792 
End bp108093 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content61% 
IMG OID638151158 
Producttype II citrate synthase 
Protein accessionYP_775205 
Protein GI115358067 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.229262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.697255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCGT CTGATGTTAA AGCCACGCTA TCGTTCAGCG ACAACTCGCC GAGCGTCGAA 
ATGCCGATCT ACAAGGGGAC GATGGGCCCG GACGTGATCG ACATCCGCAA GCTGTACGGC
CAGACCGGCA AGTTCACTTA CGACCCGGGC TTCATGTCGA CGGCAGCTTG TAATTCGGCG
ATCACGTACA TCGACGGCGA CAAGGGCGAA CTGCTGTACC GCGGCTACCC GATCGACAAC
CTCGCGCAGA ACGCCGACTT CCTTGAGACC TGCTACCTGC TGCTGAAGGG CGAGCTGCCG
AACGCCGCGC AAAAGAAGGA ATTCGTCGAC ACCGTCACGA AGCACACGAT GGTGCACGAG
CAGATGCACT TCTTCTTCCG TGGCTTCCGT CGCGACGCGC ACCCGATGGC GGTGCTGGTG
GCGGCCGTCG GCGCGCTGTC GGCGTTCTAC CACGACTCGC TCGACATCAA CGATCCGCGT
CACCGTGAAG TATCGGCGAT CCGCATGATC GCGAAGCTGC CGACGCTCGT CGCGATGGCG
TACAAGTTCA GCATCGGCCA GCCGTTCGTT TATCCGAAGA ACGAACTGTC GTACAGCGCG
AACTTCATGC ACATGATGTT CTCGAACCCG TGCGAAGAGT ACAAGGTCAA CGACGTGCTC
GTGCGCGCGC TCGACCGTAT CCTGATCCTG CACGCCGATC ACGAGCAGAA CGCATCGACG
TCGACGGTCC GCCTGGCCGG CTCGTCGGGC GCGAACCCGT TCGCGTGTAT CGCTGCCGGT
ATCGCATGTC TGTGGGGCCC GGCGCACGGT GGTGCGAACG AAGCCGCGCT GAACATGCTC
GAGCAAATCG GTTCGCCGGA CAACATCCCC GAATTCATCA AGCAGGTGAA GGACAAGAAT
TCGGGCGTGA AGCTGATGGG TTTCGGCCAC CGCGTGTACA AGAACTACGA CCCGCGTGCG
AAGCTGATGC GCGAGACGTG CTACGAAGTG CTGAACGAAC TGGGCCTGCA CGACGACCCG
CTGTTCAAGC TCGCGATGCA GCTCGAGAAG ATCGCGCTGG AAGACGAATA CTTCGTGTCG
CGCAAGCTGT ACCCGAACGT CGACTTCTAC TCGGGCATCG TTCAGCGCGC GCTGGGCATC
CCGACGTCGA TGTTCACGTG TATCTTCGCG ATGGCACGTA CGGTCGGCTG GATCGCACAG
TGGAACGAAA TGATTGCGGA TCCGGAGCAG AAGATCGGCC GTCCGCGTCA GCTGTTCATC
GGCGACGCGC CGCGCGAAGC GAAGCCGATC AACGCACGTT AA
 
Protein sequence
MTPSDVKATL SFSDNSPSVE MPIYKGTMGP DVIDIRKLYG QTGKFTYDPG FMSTAACNSA 
ITYIDGDKGE LLYRGYPIDN LAQNADFLET CYLLLKGELP NAAQKKEFVD TVTKHTMVHE
QMHFFFRGFR RDAHPMAVLV AAVGALSAFY HDSLDINDPR HREVSAIRMI AKLPTLVAMA
YKFSIGQPFV YPKNELSYSA NFMHMMFSNP CEEYKVNDVL VRALDRILIL HADHEQNAST
STVRLAGSSG ANPFACIAAG IACLWGPAHG GANEAALNML EQIGSPDNIP EFIKQVKDKN
SGVKLMGFGH RVYKNYDPRA KLMRETCYEV LNELGLHDDP LFKLAMQLEK IALEDEYFVS
RKLYPNVDFY SGIVQRALGI PTSMFTCIFA MARTVGWIAQ WNEMIADPEQ KIGRPRQLFI
GDAPREAKPI NAR