| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5404 |
|---|
| Symbol | |
|---|
| ID | 6179754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 2644488 |
|---|
| End bp | 2644988 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641685159 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001812064 |
|---|
| Protein GI | 172064413 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0298216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.693163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA TCACGATCCG GCACAGCGAG ACGCACGACG TCGACGCGAT CCGGCGAATC
GTCGCGCACC CCGCGGTGTA CATGAACACG CTCCAGCAAC CGTTTCCGTC GCACGAGAAA
TGGCAGCAGC GACTCGACCG CCTGCACGAA CAGGGCGTGA GCCTCGTCGC CGAACTCGAC
GGCGCGGTGG TCGGCCATCT CGCGCTGCAT CCGGAGCAGA ACCCGCGCCG GCGTCATGCG
GCGTCGCTCG GGATGGTGGT CGACGCGTCG CATCACGGTC GCGGCATCGG CGGCCGGCTC
CTGGCCGCTG CCATCGAACT CGCCGAAAAC TGGCTCAACG TCACGCGGCT TGAATTGACC
GTATTCGTCG ACAACCCGGC AGCTATCGCG CTGTATGAGA AGCACGGTTT CCGGATCGAG
GGAGAGGCGC CGGACTATGC GCTGCGCGAC GGCGCGTATG CGTCGGTGTA TCAGATGGCG
CGGATCAAGG GGCGGCAGTG A
|
|---|
| Protein sequence | MTDITIRHSE THDVDAIRRI VAHPAVYMNT LQQPFPSHEK WQQRLDRLHE QGVSLVAELD
GAVVGHLALH PEQNPRRRHA ASLGMVVDAS HHGRGIGGRL LAAAIELAEN WLNVTRLELT
VFVDNPAAIA LYEKHGFRIE GEAPDYALRD GAYASVYQMA RIKGRQ
|
|---|
| |