Gene BamMC406_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4185 
Symbol 
ID6180380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1232289 
End bp1233737 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content69% 
IMG OID641683954 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001810865 
Protein GI172063214 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0670808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT CGATCACCCT GCGGCTGTCG GCGATGTTCG GCATCGTGTC GCTGCTCGTG 
TTCACGCTGG TCGGCTGCGG GCTGTTCGTG ATGATGGAGC GCCAGCTGTT CGCCGAACTG
CGCGCGACGA TCGACACGCG CGCGAAGGTC GCGCAGATGA TCGTGTCGCA CGCGACCACG
GCCGCGCGCG GCCGCCTGAT GCAGGAAAAG CTCGCCGATC TCGAACCGCC CGACGGCTCG
ACGCGCTACC AGATCGAGAG CCCCGACGCC GACTTTCGCT TCGGCCATCC GGTCGACGGC
GTGCCCGTCG GCGAGCCGTT CGGTGCGTTC CAGCAGTACG CGCTCAACGA CAGCAGCTAC
GACGTGATGA CGAAGACCGT CGCGGTCGCC GGCAGCGGCG AGCGGCCCGA CCTGAAGCTG
ATCGTCGCGA CGTCGTGCGA GCGCACGCAG CGGATGCTGC GCCGGTTCGC GTGGACGCTC
GCCGCGCTGA TCGCGACGGC CACCGTGCTC ACGCTGCTGC TGAGCCGCGC GGTCGCGCGC
TTCGGGCTCG CACCGCTCGA ACGGCTGTCG CAGGACGCCG CGGCCATCAG TGCGACCAAT
CGCCGCCAGC GGCTGCACAC CGACGCGCTG CCGACCGAGC TGCGCGATCT CGCCGCATCG
TTCAACGGCG CGCTGGAGCG CATCCAGCAG ACCTATGCGC GGCTCGAGGC GTTCAACGCG
GACGTCGCGC ACGAGCTGCG CACGCCGATC AGCATCCTGA TCGGCCAGAC CCAGGTCGCG
CTGACGAGCC GCGACCGTTC GGTCGATCGC ATGCGCCAGA CGCTGCAGTC GAATCTCGAA
GAGTTCGAAC GGTTGCGCGT GATCATCAAC GACATGCTGT TCCTGTCGCG CAGCGATCGC
GGCGAACGCG CGACCGACCT GAAGCACGTG TCGCTTGCCG ACGAAGTGCG GCGCATGCTC
GACTTCCTCG AAATTCCGCT CGATGAAGCG CAATTGCGGG CCGAACTGCA CGGCGATGCG
CGCGCGGCGG TCGACCCGTC GCTGTTCCGC CGCGCGATGA CGAACCTGCT GATCAACGCG
ATCCAGCATT CGGCGCCCGG CGCGACGCTG AACGTGACGA TCACGCGCCG CGACACGCTC
GTCGACGTGT CGGTCGCGAA CCCCGGCGAG CCGATCGATC CCGCGCAGCG CTCGCACGTG
TTCGAGCGTT TCTACCGGCT CGAGGAAGCG CGCGCGAACA GCAAGGAGAA CCACGGGCTG
GGGCTGTCGA TCGTCAAGGC GGTCGCGGAG ATGCACGGCG GAAGCGTGTT CGTCGCGTGT
TCGGACGGCA TCAATACGTT CGGCTTCTCG GTGTCGACGC AACCGTGCAG CGGCGACCCG
CTGCCCGCGG CCGATGCCGG CGACCCGCAC CCGCTGCGGC CGGCGCCCGC CCCTCGCGCA
TTGCATTGA
 
Protein sequence
MKRSITLRLS AMFGIVSLLV FTLVGCGLFV MMERQLFAEL RATIDTRAKV AQMIVSHATT 
AARGRLMQEK LADLEPPDGS TRYQIESPDA DFRFGHPVDG VPVGEPFGAF QQYALNDSSY
DVMTKTVAVA GSGERPDLKL IVATSCERTQ RMLRRFAWTL AALIATATVL TLLLSRAVAR
FGLAPLERLS QDAAAISATN RRQRLHTDAL PTELRDLAAS FNGALERIQQ TYARLEAFNA
DVAHELRTPI SILIGQTQVA LTSRDRSVDR MRQTLQSNLE EFERLRVIIN DMLFLSRSDR
GERATDLKHV SLADEVRRML DFLEIPLDEA QLRAELHGDA RAAVDPSLFR RAMTNLLINA
IQHSAPGATL NVTITRRDTL VDVSVANPGE PIDPAQRSHV FERFYRLEEA RANSKENHGL
GLSIVKAVAE MHGGSVFVAC SDGINTFGFS VSTQPCSGDP LPAADAGDPH PLRPAPAPRA
LH