Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4185 |
Symbol | |
ID | 6180380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1232289 |
End bp | 1233737 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641683954 |
Product | heavy metal sensor signal transduction histidine kinase |
Protein accession | YP_001810865 |
Protein GI | 172063214 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0670808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT CGATCACCCT GCGGCTGTCG GCGATGTTCG GCATCGTGTC GCTGCTCGTG TTCACGCTGG TCGGCTGCGG GCTGTTCGTG ATGATGGAGC GCCAGCTGTT CGCCGAACTG CGCGCGACGA TCGACACGCG CGCGAAGGTC GCGCAGATGA TCGTGTCGCA CGCGACCACG GCCGCGCGCG GCCGCCTGAT GCAGGAAAAG CTCGCCGATC TCGAACCGCC CGACGGCTCG ACGCGCTACC AGATCGAGAG CCCCGACGCC GACTTTCGCT TCGGCCATCC GGTCGACGGC GTGCCCGTCG GCGAGCCGTT CGGTGCGTTC CAGCAGTACG CGCTCAACGA CAGCAGCTAC GACGTGATGA CGAAGACCGT CGCGGTCGCC GGCAGCGGCG AGCGGCCCGA CCTGAAGCTG ATCGTCGCGA CGTCGTGCGA GCGCACGCAG CGGATGCTGC GCCGGTTCGC GTGGACGCTC GCCGCGCTGA TCGCGACGGC CACCGTGCTC ACGCTGCTGC TGAGCCGCGC GGTCGCGCGC TTCGGGCTCG CACCGCTCGA ACGGCTGTCG CAGGACGCCG CGGCCATCAG TGCGACCAAT CGCCGCCAGC GGCTGCACAC CGACGCGCTG CCGACCGAGC TGCGCGATCT CGCCGCATCG TTCAACGGCG CGCTGGAGCG CATCCAGCAG ACCTATGCGC GGCTCGAGGC GTTCAACGCG GACGTCGCGC ACGAGCTGCG CACGCCGATC AGCATCCTGA TCGGCCAGAC CCAGGTCGCG CTGACGAGCC GCGACCGTTC GGTCGATCGC ATGCGCCAGA CGCTGCAGTC GAATCTCGAA GAGTTCGAAC GGTTGCGCGT GATCATCAAC GACATGCTGT TCCTGTCGCG CAGCGATCGC GGCGAACGCG CGACCGACCT GAAGCACGTG TCGCTTGCCG ACGAAGTGCG GCGCATGCTC GACTTCCTCG AAATTCCGCT CGATGAAGCG CAATTGCGGG CCGAACTGCA CGGCGATGCG CGCGCGGCGG TCGACCCGTC GCTGTTCCGC CGCGCGATGA CGAACCTGCT GATCAACGCG ATCCAGCATT CGGCGCCCGG CGCGACGCTG AACGTGACGA TCACGCGCCG CGACACGCTC GTCGACGTGT CGGTCGCGAA CCCCGGCGAG CCGATCGATC CCGCGCAGCG CTCGCACGTG TTCGAGCGTT TCTACCGGCT CGAGGAAGCG CGCGCGAACA GCAAGGAGAA CCACGGGCTG GGGCTGTCGA TCGTCAAGGC GGTCGCGGAG ATGCACGGCG GAAGCGTGTT CGTCGCGTGT TCGGACGGCA TCAATACGTT CGGCTTCTCG GTGTCGACGC AACCGTGCAG CGGCGACCCG CTGCCCGCGG CCGATGCCGG CGACCCGCAC CCGCTGCGGC CGGCGCCCGC CCCTCGCGCA TTGCATTGA
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Protein sequence | MKRSITLRLS AMFGIVSLLV FTLVGCGLFV MMERQLFAEL RATIDTRAKV AQMIVSHATT AARGRLMQEK LADLEPPDGS TRYQIESPDA DFRFGHPVDG VPVGEPFGAF QQYALNDSSY DVMTKTVAVA GSGERPDLKL IVATSCERTQ RMLRRFAWTL AALIATATVL TLLLSRAVAR FGLAPLERLS QDAAAISATN RRQRLHTDAL PTELRDLAAS FNGALERIQQ TYARLEAFNA DVAHELRTPI SILIGQTQVA LTSRDRSVDR MRQTLQSNLE EFERLRVIIN DMLFLSRSDR GERATDLKHV SLADEVRRML DFLEIPLDEA QLRAELHGDA RAAVDPSLFR RAMTNLLINA IQHSAPGATL NVTITRRDTL VDVSVANPGE PIDPAQRSHV FERFYRLEEA RANSKENHGL GLSIVKAVAE MHGGSVFVAC SDGINTFGFS VSTQPCSGDP LPAADAGDPH PLRPAPAPRA LH
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