Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2532 |
Symbol | |
ID | 6178757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2812981 |
End bp | 2813982 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641682307 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001809225 |
Protein GI | 172061573 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.607958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCCG CTGCGTCGTC CGTTGCCCCA GCCCCGACCG TCGTCGCCGT GATCGCGTAC GACGGCATCA GCCCGTTCCA CCTGTCGGTG CCGTCCGTCG TGTTCGGCAA GGAGCGCGAT GCGGCCGCGG CGCCCGCGTT CGAGTTCCGC GTGTGCTCGG CCGAGCGCGG CCCGCTGGCG ACGACGGGCG GCTTCACGAT CACCGCGCCG CACGGGCTCG ACGCACTCGG CGACGCGGAC ATCGTCATCG TGCCGGCGTG GCGCGATCCG GCCGAAGCGC CGCCGGACGT GCTGGTCGAC GCGGTACGCG CGGCGGCCGC GCGCGGCGCG CAGGTCGTCG GCCTGTGCCT CGGCGCGTAC GTGCTCGCCG CGGCCGGGCT GCTAGACGGA CGCCCGGCCA CGACGCACTG GGCGTGGGCC GACGACTTCG CGCAGCGCTT TCCGCGCGTG AAGCTCGACC CCGACGTGCT GTACGTCGAC GACGGCAACC TGATGACGTC GGCCGGCACC GCCGCGGGGC TCGACTGCTG CCTGCACGTG GTGCGGCGGC GCTTCGGCTC GGACGCCGCG AACCAGATCG CGCGCCGTCT CGTGATCCCG CCGCACCGCC AGGGCGGGCA GGCGCAGTAC GTGCCCCAGC CCGTCGCCGC GCATCCGCGC GACGCGCGGC TCGCCGGCCT GCTCGACTGG GTGCGCGCGC ATCTAGACGT CGCGCACAGT GTGGATTCGC TCGCCGAACG CGTGCTGATG AGCCGGCGCA CGTTCACGCG CCACTTCCGC CAGGCGACGG GCATGACCGT CACCGCGTGG CTGCAAGCCG AGCGGCTCAC GCGTGCGCAG CATCTGCTGG AAACCACCGG ACAATCGATC GACGCGATCG CGCAGGCGGC CGGCTATGGG TCGAGCGTGT CGCTGCGCCA GCATTTCGCG GGCGCGCTCG GCACGTCGCC GTCGGCCTAT CGGAGGGAAT TTCGCGGCGC CGGGCCCGAC GCGCGGCGCT AG
|
Protein sequence | MRAAASSVAP APTVVAVIAY DGISPFHLSV PSVVFGKERD AAAAPAFEFR VCSAERGPLA TTGGFTITAP HGLDALGDAD IVIVPAWRDP AEAPPDVLVD AVRAAAARGA QVVGLCLGAY VLAAAGLLDG RPATTHWAWA DDFAQRFPRV KLDPDVLYVD DGNLMTSAGT AAGLDCCLHV VRRRFGSDAA NQIARRLVIP PHRQGGQAQY VPQPVAAHPR DARLAGLLDW VRAHLDVAHS VDSLAERVLM SRRTFTRHFR QATGMTVTAW LQAERLTRAQ HLLETTGQSI DAIAQAAGYG SSVSLRQHFA GALGTSPSAY RREFRGAGPD ARR
|
| |