| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2279 |
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| Symbol | |
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| ID | 6179077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2540124 |
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| End bp | 2542073 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682052 |
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| Product | ABC transporter related |
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| Protein accession | YP_001808974 |
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| Protein GI | 172061322 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTT ATTCCATTAC CGGCGCGCAA CTCGCGTTCG GTCACGTCGC GTTGCTCGAT
CACGCGGACT TCTCGCTGGA AGCCGGCGAA CGCGTCGGCC TGATCGGCCG CAACGGCGCA
GGCAAGTCGT CGCTGCTGAA GATCGTCGCC GGGCTCGCGA AGCCCGATGA CGGGCTGATC
ACGCGCCAGC AGGAGCTGGT GACCGTCTAC GTGCCGCAGG AGCCCGAATT CGAACCCGGC
GCGACGGTGT TCGAGGCCGT GGCATCGGGG CTCACGCACA CGCGCGAAGT GCTCGAAGAA
TACGATTCGA TCGCGCACCG CCTCGCCGAG ACACCCGAAG GCGCCGAGCA CGATGCGCTG
CTCGCGCGGA TGAACGCGCT GCAGTCGTCG CTCGACATGC ACGACGCGTG GAACTGGCGC
ACGCGCGTGT CGATGACGCT CGCGCAGATC GGCCTGACGG ACGGCGACGC CAGCGTCGAC
GCGCTGTCGG GCGGGATGCA GAAGCGCGTC GCGCTGGCGC GCGCGCTGGT GCTGCAGCCC
GACGTGCTGC TGCTCGACGA ACCGACCAAC CACCTCGACT TCGACGGCAT CCGCTGGCTG
GAAGAATTGC TGGTCTCGCA GCGCGCGGGC CTGCTGTTCA TCACCCACGA TCGCGCGTTC
CTCGACCGCG TCGCGACACG CATCGTCGAA CTCGATCGCG GCGGGCTGCT GTCGTATCCG
GGCAATTTCT CCGCGTACCA GACGCGCAAG GCGCAGCAAC TCGAAGTCGA GCGCGTGGAA
AACGAGAAGT TCGACAAGCT GCTCGCGCAG GAAGAAGTGT GGATCCGCAA GGGCGTCGAG
GCGCGCCGTA CGCGCAGCGT CGGGCGCATC GCGCGGCTCG TGCAGATGCG CAACGAGCGC
GCGGAGCGCC GCAATTCGCA GGGCAACGTG AAGCTCGACG TCGCGCAGGG CGAGAAGTCG
GGCAAGATCG TCGCGGAACT GACGGACGTG ACGAAGCGCT ACGGCGATCG AACGGTGGTC
GACACGTTCT CGACGTCGGT CATGCGCGGC GACAAGATCG GTTTCGTCGG CCCGAACGGC
GCCGGCAAGA CCACGCTGCT CAAGCTGATC CTCGGCGAGC TGAAGCCCGA CGCGGGCACG
GTGCGCACGG GCACGAACCT GCAGGTCGCG TATTTCGACC AGATGCGCGC GCAGCTCGAC
CAGGACAAGA GCCTGGCCGA TACGATCAGC CCCGGTAGCG AATGGGTCGA GATCGGCGGC
GTGCGCAAGC ACGTGATGAG CTATCTCGGC GACTTCCTGT TCGCGCCGGA ACGCGCGCGC
TCGCCGGTGA AGTCGCTGTC CGGCGGCGAG CGCAACCGGT TGCTGCTCGC GCGCCTGTTC
GCGCGTCCGG CCAACGTGCT GGTACTCGAC GAACCGACCA ACGACCTCGA CATCCCGACG
CTCGAACTGC TCGAAGAGCT GCTGGCCGAC TATGACGGCA CGGTGCTGCT CGTGAGCCAC
GATCGCGCGT TCCTCGACAA CGTCGTGACG TCGGTGATCG CGGCCGAGGG CGACGGCAAG
TGGCGCGAAT ACGTCGGCGG TTTCACCGAC TGGCAGATCC AGAGCGAGCG TTCGCAGCAG
CTCGCGCAGC AGGAAGCGGC GAAGCGCGCG GTGAAGGAAG CAGCGCCGGT CAAGGAAGAC
CCGGCGAAAA GCGCGGCCGG CCGTAACGCG CAGCGCACGG TCAAGCTGTC GTTCAACGAG
CAACGCGAAC TCGACGCGCT GCCGCAGAAG ATCGCGGCGC TCGAGGAAGA ACAGAAGACG
ATCAACGCGC AGCTCGAGGA CGGCGCAATC TTCGCGAAGG ATCCGCAGGA AGGCACGCGC
CTGACCGAGC GGTTCGCGGC GATCGACGAC GAACTGCTCG CCGCGCTCGA GCGGTGGGAG
ACGCTCGAGG CGAAGCGCAA ACCGGTCTGA
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| Protein sequence | MSLYSITGAQ LAFGHVALLD HADFSLEAGE RVGLIGRNGA GKSSLLKIVA GLAKPDDGLI
TRQQELVTVY VPQEPEFEPG ATVFEAVASG LTHTREVLEE YDSIAHRLAE TPEGAEHDAL
LARMNALQSS LDMHDAWNWR TRVSMTLAQI GLTDGDASVD ALSGGMQKRV ALARALVLQP
DVLLLDEPTN HLDFDGIRWL EELLVSQRAG LLFITHDRAF LDRVATRIVE LDRGGLLSYP
GNFSAYQTRK AQQLEVERVE NEKFDKLLAQ EEVWIRKGVE ARRTRSVGRI ARLVQMRNER
AERRNSQGNV KLDVAQGEKS GKIVAELTDV TKRYGDRTVV DTFSTSVMRG DKIGFVGPNG
AGKTTLLKLI LGELKPDAGT VRTGTNLQVA YFDQMRAQLD QDKSLADTIS PGSEWVEIGG
VRKHVMSYLG DFLFAPERAR SPVKSLSGGE RNRLLLARLF ARPANVLVLD EPTNDLDIPT
LELLEELLAD YDGTVLLVSH DRAFLDNVVT SVIAAEGDGK WREYVGGFTD WQIQSERSQQ
LAQQEAAKRA VKEAAPVKED PAKSAAGRNA QRTVKLSFNE QRELDALPQK IAALEEEQKT
INAQLEDGAI FAKDPQEGTR LTERFAAIDD ELLAALERWE TLEAKRKPV
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