| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1930 |
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| Symbol | |
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| ID | 6177359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2151975 |
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| End bp | 2153237 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681689 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_001808628 |
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| Protein GI | 172060976 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.4255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCTC GACTCGACTC GCTCCAGCCC TATCCCTTCG AAAAGCTGCG CGCCCTGTTC
AAGGACGTGA CGCCCGCTGC CGGTACGCCC GCTGCCGGTA CGCCCGCTGC CGGTACGCCC
GCTGCCAGCC TGAAACCGAT CAGCTTCGGC ATCGGCGAGC CCAAGCATCC GACGCCGGCG
CTGATCCGCG ACGCCGTCGT GGCCGCGCTC GACGGCCTCG CGTCGTACCC GGCCACCGCC
GGCTCGGACG CGCTGCGCAC GTCGATCGCG CACTGGCTCG AACGCCGCTA CGGGCTGCCG
GCGATCGATC CGGCCACGCA AGTGCTGCCC GTGTCGGGGT CGCGCGAGGC GCTGTTCTCG
CTCGCGCAGA CGGTGATCGA TGCGCGCGCG AGCGCGGACG GCAAGAAGGC GATCGTACTC
TGTCCGAATC CGTTCTATCA AATTTACGAA GGCGCGGCGC TCCTGGCCGG TGCCGAACCC
TATTTCGCGA ACAGCGACCC GGCGCGCAAC TTCGCGTGTG ACTATGCGGC CGTGCCCGAC
GAGGTCTGGG CGCGCACCCA GCTGCTGTAC GTGTGCTCGC CGGGCAATCC GACGGGCGCC
GTGCTGACGC TCGACGACTG GCGCGAGTTG TTCGCGCTGT CCGACCGCCA CGGTTTCGTG
ATCGCGTCCG ACGAGTGCTA TTCGGAAATC TATTTCGACG AAGCGGCGCC GCCGCTCGGC
GGCCTGGAGG CCGCGCACCG CCTCGGCCGC GGCTTCGAAC GGCTCGTGAT GCTGTCGAGC
CTGTCGAAGC GCTCGAACGT GCCGGGCATG CGCTCGGGTT TCGTCGCCGG CGACGCCGCG
CTGCTCAAGA AATTCCTGCT GTACCGCACG TACCATGGTG CGGCGCTGTC GCCGGTCTGG
CAGCACGCGA GCATCGCCGC ATGGAACGAC GAGGCGCACG TGCGCGAGAA CCGCGCGCTG
TACCTGCAGA AGTTCAACAC GGTCACGCCG ATGCTGGCCG ACGTGATCGA CGTGAAGCTG
CCCGACGCCG CGTTCTACCT GTGGGCCAAC GTCGCGCGCA CCGGCCTGTC GGACACCGAG
TTCGCCCGCC GCCTGTACGC CGACTATAAT GTGACGGTTC TGCCCGGCTC GTACCTGGCG
CGCGACGCGC ACGGCACGAA TCCGGGCCGC GATTTCATCC GGATCGCGCT CGTCGCGGGC
ACCCCCGAAT GCGTCGAGGG CGCGCAACGC ATCGTCGATT TCTGCCGGGC TCTCGCGCGG
TAA
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| Protein sequence | MNPRLDSLQP YPFEKLRALF KDVTPAAGTP AAGTPAAGTP AASLKPISFG IGEPKHPTPA
LIRDAVVAAL DGLASYPATA GSDALRTSIA HWLERRYGLP AIDPATQVLP VSGSREALFS
LAQTVIDARA SADGKKAIVL CPNPFYQIYE GAALLAGAEP YFANSDPARN FACDYAAVPD
EVWARTQLLY VCSPGNPTGA VLTLDDWREL FALSDRHGFV IASDECYSEI YFDEAAPPLG
GLEAAHRLGR GFERLVMLSS LSKRSNVPGM RSGFVAGDAA LLKKFLLYRT YHGAALSPVW
QHASIAAWND EAHVRENRAL YLQKFNTVTP MLADVIDVKL PDAAFYLWAN VARTGLSDTE
FARRLYADYN VTVLPGSYLA RDAHGTNPGR DFIRIALVAG TPECVEGAQR IVDFCRALAR
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